Torii M - Search Results

1

A generalizable NLP framework for fast development of pattern-based biomedical relation extraction systems.

Peng Y, Torii M, Wu CH, Vijay-Shanker K. Peng Y, et al. Among authors: torii m. BMC Bioinformatics. 2014 Aug 23;15(1):285. doi: 10.1186/1471-2105-15-285. BMC Bioinformatics. 2014. PMID: 25149151 Free PMC article.

2

iSimp in BioC standard format: enhancing the interoperability of a sentence simplification system.

Peng Y, Tudor CO, Torii M, Wu CH, Vijay-Shanker K. Peng Y, et al. Among authors: torii m. Database (Oxford). 2014 May 21;2014:bau038. doi: 10.1093/database/bau038. Print 2014. Database (Oxford). 2014. PMID: 24850848 Free PMC article.

3

RLIMS-P 2.0: A Generalizable Rule-Based Information Extraction System for Literature Mining of Protein Phosphorylation Information.

Torii M, Arighi CN, Li G, Wang Q, Wu CH, Vijay-Shanker K. Torii M, et al. IEEE/ACM Trans Comput Biol Bioinform. 2015 Jan-Feb;12(1):17-29. doi: 10.1109/TCBB.2014.2372765. IEEE/ACM Trans Comput Biol Bioinform. 2015. PMID: 26357075 Free PMC article.

4

Using name-internal and contextual features to classify biological terms.

Torii M, Kamboj S, Vijay-Shanker K. Torii M, et al. J Biomed Inform. 2004 Dec;37(6):498-511. doi: 10.1016/j.jbi.2004.08.007. J Biomed Inform. 2004. PMID: 15542022 Free article.

5

BioC: a minimalist approach to interoperability for biomedical text processing.

Comeau DC, Islamaj Doğan R, Ciccarese P, Cohen KB, Krallinger M, Leitner F, Lu Z, Peng Y, Rinaldi F, Torii M, Valencia A, Verspoor K, Wiegers TC, Wu CH, Wilbur WJ. Comeau DC, et al. Among authors: torii m. Database (Oxford). 2013 Sep 18;2013:bat064. doi: 10.1093/database/bat064. Print 2013. Database (Oxford). 2013. PMID: 24048470 Free PMC article.

6

A framework for biomedical figure segmentation towards image-based document retrieval.

Lopez LD, Yu J, Arighi C, Tudor CO, Torii M, Huang H, Vijay-Shanker K, Wu C. Lopez LD, et al. Among authors: torii m. BMC Syst Biol. 2013;7 Suppl 4(Suppl 4):S8. doi: 10.1186/1752-0509-7-S4-S8. Epub 2013 Oct 23. BMC Syst Biol. 2013. PMID: 24565394 Free PMC article.

7

RLIMS-P: an online text-mining tool for literature-based extraction of protein phosphorylation information.

Torii M, Li G, Li Z, Oughtred R, Diella F, Celen I, Arighi CN, Huang H, Vijay-Shanker K, Wu CH. Torii M, et al. Database (Oxford). 2014 Aug 13;2014:bau081. doi: 10.1093/database/bau081. Print 2014. Database (Oxford). 2014. PMID: 25122463 Free PMC article.

8

A comparison study on algorithms of detecting long forms for short forms in biomedical text.

Torii M, Hu ZZ, Song M, Wu CH, Liu H. Torii M, et al. BMC Bioinformatics. 2007 Nov 27;8 Suppl 9(Suppl 9):S5. doi: 10.1186/1471-2105-8-S9-S5. BMC Bioinformatics. 2007. PMID: 18047706 Free PMC article.

9

An online literature mining tool for protein phosphorylation.

Yuan X, Hu ZZ, Wu HT, Torii M, Narayanaswamy M, Ravikumar KE, Vijay-Shanker K, Wu CH. Yuan X, et al. Among authors: torii m. Bioinformatics. 2006 Jul 1;22(13):1668-9. doi: 10.1093/bioinformatics/btl159. Epub 2006 Apr 27. Bioinformatics. 2006. PMID: 16644790

10

BioTagger-GM: a gene/protein name recognition system.

Torii M, Hu Z, Wu CH, Liu H. Torii M, et al. J Am Med Inform Assoc. 2009 Mar-Apr;16(2):247-55. doi: 10.1197/jamia.M2844. Epub 2008 Dec 11. J Am Med Inform Assoc. 2009. PMID: 19074302 Free PMC article.

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