Snyder MP - Search Results

1

Genome-wide map of regulatory interactions in the human genome.

Heidari N, Phanstiel DH, He C, Grubert F, Jahanbani F, Kasowski M, Zhang MQ, Snyder MP. Heidari N, et al. Among authors: snyder mp. Genome Res. 2014 Dec;24(12):1905-17. doi: 10.1101/gr.176586.114. Epub 2014 Sep 16. Genome Res. 2014. PMID: 25228660 Free PMC article.

2

Identification of novel functional elements in the human genome.

Lian Z, Euskirchen G, Rinn J, Martone R, Bertone P, Hartman S, Royce T, Nelson K, Sayward F, Luscombe N, Yang J, Li JL, Miller P, Urban AE, Gerstein M, Weissman S, Snyder M. Lian Z, et al. Cold Spring Harb Symp Quant Biol. 2003;68:317-22. doi: 10.1101/sqb.2003.68.317. Cold Spring Harb Symp Quant Biol. 2003. PMID: 15338632 No abstract available.

3

Large-scale mutagenesis of the yeast genome using a Tn7-derived multipurpose transposon.

Kumar A, Seringhaus M, Biery MC, Sarnovsky RJ, Umansky L, Piccirillo S, Heidtman M, Cheung KH, Dobry CJ, Gerstein MB, Craig NL, Snyder M. Kumar A, et al. Genome Res. 2004 Oct;14(10A):1975-86. doi: 10.1101/gr.2875304. Genome Res. 2004. PMID: 15466296 Free PMC article.

4

Applications of DNA tiling arrays to experimental genome annotation and regulatory pathway discovery.

Bertone P, Gerstein M, Snyder M. Bertone P, et al. Chromosome Res. 2005;13(3):259-74. doi: 10.1007/s10577-005-2165-0. Chromosome Res. 2005. PMID: 15868420 Review.

5

Design optimization methods for genomic DNA tiling arrays.

Bertone P, Trifonov V, Rozowsky JS, Schubert F, Emanuelsson O, Karro J, Kao MY, Snyder M, Gerstein M. Bertone P, et al. Genome Res. 2006 Feb;16(2):271-81. doi: 10.1101/gr.4452906. Epub 2005 Dec 19. Genome Res. 2006. PMID: 16365382 Free PMC article.

6

Predicting essential genes in fungal genomes.

Seringhaus M, Paccanaro A, Borneman A, Snyder M, Gerstein M. Seringhaus M, et al. Genome Res. 2006 Sep;16(9):1126-35. doi: 10.1101/gr.5144106. Epub 2006 Aug 9. Genome Res. 2006. PMID: 16899653 Free PMC article.

7

Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome.

Emanuelsson O, Nagalakshmi U, Zheng D, Rozowsky JS, Urban AE, Du J, Lian Z, Stolc V, Weissman S, Snyder M, Gerstein MB. Emanuelsson O, et al. Genome Res. 2007 Jun;17(6):886-97. doi: 10.1101/gr.5014606. Epub 2006 Nov 21. Genome Res. 2007. PMID: 17119069 Free PMC article.

8

High-throughput methods of regulatory element discovery.

Hudson ME, Snyder M. Hudson ME, et al. Biotechniques. 2006 Dec;41(6):673, 675, 677 passim. doi: 10.2144/000112322. Biotechniques. 2006. PMID: 17191608 Free article. Review.

9

Novel transcribed regions in the human genome.

Rozowsky J, Wu J, Lian Z, Nagalakshmi U, Korbel JO, Kapranov P, Zheng D, Dyke S, Newburger P, Miller P, Gingeras TR, Weissman S, Gerstein M, Snyder M. Rozowsky J, et al. Cold Spring Harb Symp Quant Biol. 2006;71:111-6. doi: 10.1101/sqb.2006.71.054. Cold Spring Harb Symp Quant Biol. 2006. PMID: 17381286

10

Systematic prediction and validation of breakpoints associated with copy-number variants in the human genome.

Korbel JO, Urban AE, Grubert F, Du J, Royce TE, Starr P, Zhong G, Emanuel BS, Weissman SM, Snyder M, Gerstein MB. Korbel JO, et al. Proc Natl Acad Sci U S A. 2007 Jun 12;104(24):10110-5. doi: 10.1073/pnas.0703834104. Epub 2007 Jun 5. Proc Natl Acad Sci U S A. 2007. PMID: 17551006 Free PMC article.

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