Gunderson KL - Search Results

1

In vitro, long-range sequence information for de novo genome assembly via transposase contiguity.

Adey A, Kitzman JO, Burton JN, Daza R, Kumar A, Christiansen L, Ronaghi M, Amini S, Gunderson KL, Steemers FJ, Shendure J. Adey A, et al. Among authors: gunderson kl. Genome Res. 2014 Dec;24(12):2041-9. doi: 10.1101/gr.178319.114. Epub 2014 Oct 19. Genome Res. 2014. PMID: 25327137 Free PMC article.

2

Haplotype-resolved whole-genome sequencing by contiguity-preserving transposition and combinatorial indexing.

Amini S, Pushkarev D, Christiansen L, Kostem E, Royce T, Turk C, Pignatelli N, Adey A, Kitzman JO, Vijayan K, Ronaghi M, Shendure J, Gunderson KL, Steemers FJ. Amini S, et al. Among authors: gunderson kl. Nat Genet. 2014 Dec;46(12):1343-9. doi: 10.1038/ng.3119. Epub 2014 Oct 19. Nat Genet. 2014. PMID: 25326703 Free PMC article.

3

Contiguity-Preserving Transposition Sequencing (CPT-Seq) for Genome-Wide Haplotyping, Assembly, and Single-Cell ATAC-Seq.

Christiansen L, Amini S, Zhang F, Ronaghi M, Gunderson KL, Steemers FJ. Christiansen L, et al. Among authors: gunderson kl. Methods Mol Biol. 2017;1551:207-221. doi: 10.1007/978-1-4939-6750-6_12. Methods Mol Biol. 2017. PMID: 28138849

4

A genome-wide scalable SNP genotyping assay using microarray technology.

Gunderson KL, Steemers FJ, Lee G, Mendoza LG, Chee MS. Gunderson KL, et al. Nat Genet. 2005 May;37(5):549-54. doi: 10.1038/ng1547. Epub 2005 Apr 17. Nat Genet. 2005. PMID: 15838508

5

Whole-genome genotyping with the single-base extension assay.

Steemers FJ, Chang W, Lee G, Barker DL, Shen R, Gunderson KL. Steemers FJ, et al. Among authors: gunderson kl. Nat Methods. 2006 Jan;3(1):31-3. doi: 10.1038/nmeth842. Nat Methods. 2006. PMID: 16369550

6

High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping.

Peiffer DA, Le JM, Steemers FJ, Chang W, Jenniges T, Garcia F, Haden K, Li J, Shaw CA, Belmont J, Cheung SW, Shen RM, Barker DL, Gunderson KL. Peiffer DA, et al. Among authors: gunderson kl. Genome Res. 2006 Sep;16(9):1136-48. doi: 10.1101/gr.5402306. Epub 2006 Aug 9. Genome Res. 2006. PMID: 16899659 Free PMC article.

7

Whole genome genotyping technologies on the BeadArray platform.

Steemers FJ, Gunderson KL. Steemers FJ, et al. Among authors: gunderson kl. Biotechnol J. 2007 Jan;2(1):41-9. doi: 10.1002/biot.200600213. Biotechnol J. 2007. PMID: 17225249

8

Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing.

Cusanovich DA, Daza R, Adey A, Pliner HA, Christiansen L, Gunderson KL, Steemers FJ, Trapnell C, Shendure J. Cusanovich DA, et al. Among authors: gunderson kl. Science. 2015 May 22;348(6237):910-4. doi: 10.1126/science.aab1601. Epub 2015 May 7. Science. 2015. PMID: 25953818 Free PMC article.

9

Massively multiplex single-cell Hi-C.

Ramani V, Deng X, Qiu R, Gunderson KL, Steemers FJ, Disteche CM, Noble WS, Duan Z, Shendure J. Ramani V, et al. Among authors: gunderson kl. Nat Methods. 2017 Mar;14(3):263-266. doi: 10.1038/nmeth.4155. Epub 2017 Jan 30. Nat Methods. 2017. PMID: 28135255 Free PMC article.

10

Sequences of 95 human MHC haplotypes reveal extreme coding variation in genes other than highly polymorphic HLA class I and II.

Norman PJ, Norberg SJ, Guethlein LA, Nemat-Gorgani N, Royce T, Wroblewski EE, Dunn T, Mann T, Alicata C, Hollenbach JA, Chang W, Shults Won M, Gunderson KL, Abi-Rached L, Ronaghi M, Parham P. Norman PJ, et al. Among authors: gunderson kl. Genome Res. 2017 May;27(5):813-823. doi: 10.1101/gr.213538.116. Epub 2017 Mar 30. Genome Res. 2017. PMID: 28360230 Free PMC article.

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