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A rigorous benchmarking of alignment-based HLA typing algorithms for RNA-seq data.
Yu D, Ayyala R, Sadek SH, Chittampalli L, Farooq H, Jung J, Nahid AA, Boldirev G, Jung M, Park S, Nguyen A, Zelikovsky A, Mancuso N, Joo JWJ, Thompson RF, Alachkar H, Mangul S. Yu D, et al. Among authors: alachkar h. bioRxiv [Preprint]. 2024 Jan 16:2023.05.22.541750. doi: 10.1101/2023.05.22.541750. bioRxiv. 2024. PMID: 38293199 Free PMC article. Preprint.
SPARC promotes leukemic cell growth and predicts acute myeloid leukemia outcome.
Alachkar H, Santhanam R, Maharry K, Metzeler KH, Huang X, Kohlschmidt J, Mendler JH, Benito JM, Hickey C, Neviani P, Dorrance AM, Anghelina M, Khalife J, Tarighat SS, Volinia S, Whitman SP, Paschka P, Hoellerbauer P, Wu YZ, Han L, Bolon BN, Blum W, Mrózek K, Carroll AJ, Perrotti D, Andreeff M, Caligiuri MA, Konopleva M, Garzon R, Bloomfield CD, Marcucci G. Alachkar H, et al. J Clin Invest. 2014 Apr;124(4):1512-24. doi: 10.1172/JCI70921. Epub 2014 Mar 3. J Clin Invest. 2014. PMID: 24590286 Free PMC article.
Quantitative characterization of T-cell repertoire in allogeneic hematopoietic stem cell transplant recipients.
Yew PY, Alachkar H, Yamaguchi R, Kiyotani K, Fang H, Yap KL, Liu HT, Wickrema A, Artz A, van Besien K, Imoto S, Miyano S, Bishop MR, Stock W, Nakamura Y. Yew PY, et al. Among authors: alachkar h. Bone Marrow Transplant. 2015 Sep;50(9):1227-34. doi: 10.1038/bmt.2015.133. Epub 2015 Jun 8. Bone Marrow Transplant. 2015. PMID: 26052909 Free PMC article. Clinical Trial.
94 results