Pallen MJ - Search Results

1

Seeking the source of Pseudomonas aeruginosa infections in a recently opened hospital: an observational study using whole-genome sequencing.

Quick J, Cumley N, Wearn CM, Niebel M, Constantinidou C, Thomas CM, Pallen MJ, Moiemen NS, Bamford A, Oppenheim B, Loman NJ. Quick J, et al. Among authors: pallen mj. BMJ Open. 2014 Nov 4;4(11):e006278. doi: 10.1136/bmjopen-2014-006278. BMJ Open. 2014. PMID: 25371418 Free PMC article.

2

Twenty years of bacterial genome sequencing.

Loman NJ, Pallen MJ. Loman NJ, et al. Among authors: pallen mj. Nat Rev Microbiol. 2015 Dec;13(12):787-94. doi: 10.1038/nrmicro3565. Epub 2015 Nov 9. Nat Rev Microbiol. 2015. PMID: 26548914 Review.

3

Draft Genome Sequence of Elizabethkingia meningoseptica Isolated from a Traumatic Wound.

Quick J, Constantinidou C, Pallen MJ, Oppenheim B, Loman NJ. Quick J, et al. Among authors: pallen mj. Genome Announc. 2014 May 8;2(3):e00355-14. doi: 10.1128/genomeA.00355-14. Genome Announc. 2014. PMID: 24812216 Free PMC article.

4

Genomic epidemiology of a protracted hospital outbreak caused by multidrug-resistant Acinetobacter baumannii in Birmingham, England.

Halachev MR, Chan JZ, Constantinidou CI, Cumley N, Bradley C, Smith-Banks M, Oppenheim B, Pallen MJ. Halachev MR, et al. Among authors: pallen mj. Genome Med. 2014 Nov 20;6(11):70. doi: 10.1186/s13073-014-0070-x. eCollection 2014. Genome Med. 2014. PMID: 25414729 Free PMC article.

5

Performance comparison of benchtop high-throughput sequencing platforms.

Loman NJ, Misra RV, Dallman TJ, Constantinidou C, Gharbia SE, Wain J, Pallen MJ. Loman NJ, et al. Among authors: pallen mj. Nat Biotechnol. 2012 May;30(5):434-9. doi: 10.1038/nbt.2198. Nat Biotechnol. 2012. PMID: 22522955 Free article.

6

High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity.

Loman NJ, Constantinidou C, Chan JZ, Halachev M, Sergeant M, Penn CW, Robinson ER, Pallen MJ. Loman NJ, et al. Among authors: pallen mj. Nat Rev Microbiol. 2012 Sep;10(9):599-606. doi: 10.1038/nrmicro2850. Epub 2012 Aug 6. Nat Rev Microbiol. 2012. PMID: 22864262 Review.

7

A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of Shiga-toxigenic Escherichia coli O104:H4.

Loman NJ, Constantinidou C, Christner M, Rohde H, Chan JZ, Quick J, Weir JC, Quince C, Smith GP, Betley JR, Aepfelbacher M, Pallen MJ. Loman NJ, et al. Among authors: pallen mj. JAMA. 2013 Apr 10;309(14):1502-10. doi: 10.1001/jama.2013.3231. JAMA. 2013. PMID: 23571589

8

High-throughput whole-genome sequencing to dissect the epidemiology of Acinetobacter baumannii isolates from a hospital outbreak.

Lewis T, Loman NJ, Bingle L, Jumaa P, Weinstock GM, Mortiboy D, Pallen MJ. Lewis T, et al. Among authors: pallen mj. J Hosp Infect. 2010 May;75(1):37-41. doi: 10.1016/j.jhin.2010.01.012. Epub 2010 Mar 17. J Hosp Infect. 2010. PMID: 20299126 Free article.

9

Epidemiological investigation of Pseudomonas aeruginosa isolates from a six-year-long hospital outbreak using high-throughput whole genome sequencing.

Snyder LA, Loman NJ, Faraj LA, Levi K, Weinstock G, Boswell TC, Pallen MJ, Ala'Aldeen DA. Snyder LA, et al. Among authors: pallen mj. Euro Surveill. 2013 Oct 17;18(42):20611. doi: 10.2807/1560-7917.es2013.18.42.20611. Euro Surveill. 2013. PMID: 24176582 Free article.

10

Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe.

Kay GL, Sergeant MJ, Zhou Z, Chan JZ, Millard A, Quick J, Szikossy I, Pap I, Spigelman M, Loman NJ, Achtman M, Donoghue HD, Pallen MJ. Kay GL, et al. Among authors: pallen mj. Nat Commun. 2015 Apr 7;6:6717. doi: 10.1038/ncomms7717. Nat Commun. 2015. PMID: 25848958 Free PMC article.

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