Sakai R - Search Results

1

Corrigendum: Duplication of a promiscuous transcription factor drives the emergence of a new regulatory network.

Pougach K, Voet A, Kondrashov FA, Voordeckers K, Christiaens JF, Baying B, Benes V, Sakai R, Aerts J, Zhu B, Van Dijck P, Verstrepen KJ. Pougach K, et al. Among authors: sakai r. Nat Commun. 2015 Feb 26;6:6543. doi: 10.1038/ncomms7543. Nat Commun. 2015. PMID: 25716750 Free PMC article. No abstract available.

2

Duplication of a promiscuous transcription factor drives the emergence of a new regulatory network.

Pougach K, Voet A, Kondrashov FA, Voordeckers K, Christiaens JF, Baying B, Benes V, Sakai R, Aerts J, Zhu B, Van Dijck P, Verstrepen KJ. Pougach K, et al. Among authors: sakai r. Nat Commun. 2014 Sep 10;5:4868. doi: 10.1038/ncomms5868. Nat Commun. 2014. PMID: 25204769 Free PMC article.

3

Sequence Diversity Diagram for comparative analysis of multiple sequence alignments.

Sakai R, Aerts J. Sakai R, et al. BMC Proc. 2014 Aug 28;8(Suppl 2 Proceedings of the 3rd Annual Symposium on Biologica):S9. doi: 10.1186/1753-6561-8-S2-S9. eCollection 2014. BMC Proc. 2014. PMID: 25237396 Free PMC article.

4

eXtasy: variant prioritization by genomic data fusion.

Sifrim A, Popovic D, Tranchevent LC, Ardeshirdavani A, Sakai R, Konings P, Vermeesch JR, Aerts J, De Moor B, Moreau Y. Sifrim A, et al. Among authors: sakai r. Nat Methods. 2013 Nov;10(11):1083-4. doi: 10.1038/nmeth.2656. Epub 2013 Sep 29. Nat Methods. 2013. PMID: 24076761 Free article.

5

TrioVis: a visualization approach for filtering genomic variants of parent-child trios.

Sakai R, Sifrim A, Vande Moere A, Aerts J. Sakai R, et al. Bioinformatics. 2013 Jul 15;29(14):1801-2. doi: 10.1093/bioinformatics/btt267. Epub 2013 May 8. Bioinformatics. 2013. PMID: 23658417 Free PMC article.

6

Pipit: visualizing functional impacts of structural variations.

Sakai R, Moisse M, Reumers J, Aerts J. Sakai R, et al. Bioinformatics. 2013 Sep 1;29(17):2206-7. doi: 10.1093/bioinformatics/btt367. Epub 2013 Jun 25. Bioinformatics. 2013. PMID: 23803468 Free PMC article.

7

dendsort: modular leaf ordering methods for dendrogram representations in R.

Sakai R, Winand R, Verbeiren T, Moere AV, Aerts J. Sakai R, et al. F1000Res. 2014 Jul 30;3:177. doi: 10.12688/f1000research.4784.1. eCollection 2014. F1000Res. 2014. PMID: 25232468 Free PMC article.

8

Meander: visually exploring the structural variome using space-filling curves.

Pavlopoulos GA, Kumar P, Sifrim A, Sakai R, Lin ML, Voet T, Moreau Y, Aerts J. Pavlopoulos GA, et al. Among authors: sakai r. Nucleic Acids Res. 2013 Jun;41(11):e118. doi: 10.1093/nar/gkt254. Epub 2013 Apr 19. Nucleic Acids Res. 2013. PMID: 23605045 Free PMC article.

9

Annotate-it: a Swiss-knife approach to annotation, analysis and interpretation of single nucleotide variation in human disease.

Sifrim A, Van Houdt JK, Tranchevent LC, Nowakowska B, Sakai R, Pavlopoulos GA, Devriendt K, Vermeesch JR, Moreau Y, Aerts J. Sifrim A, et al. Among authors: sakai r. Genome Med. 2012 Sep 26;4(9):73. doi: 10.1186/gm374. eCollection 2012. Genome Med. 2012. PMID: 23013645 Free PMC article.

10

An eQTL biological data visualization challenge and approaches from the visualization community.

Bartlett CW, Cheong SY, Hou L, Paquette J, Lum PY, Jäger G, Battke F, Vehlow C, Heinrich J, Nieselt K, Sakai R, Aerts J, Ray WC. Bartlett CW, et al. Among authors: sakai r. BMC Bioinformatics. 2012;13 Suppl 8(Suppl 8):S8. doi: 10.1186/1471-2105-13-S8-S8. Epub 2012 May 18. BMC Bioinformatics. 2012. PMID: 22607587 Free PMC article.

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