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High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus.
Bayer PE, Ruperao P, Mason AS, Stiller J, Chan CK, Hayashi S, Long Y, Meng J, Sutton T, Visendi P, Varshney RK, Batley J, Edwards D. Bayer PE, et al. Among authors: chan ck. Theor Appl Genet. 2015 Jun;128(6):1039-47. doi: 10.1007/s00122-015-2488-y. Epub 2015 Mar 10. Theor Appl Genet. 2015. PMID: 25754422 Free article.
Assembly and comparison of two closely related Brassica napus genomes.
Bayer PE, Hurgobin B, Golicz AA, Chan CK, Yuan Y, Lee H, Renton M, Meng J, Li R, Long Y, Zou J, Bancroft I, Chalhoub B, King GJ, Batley J, Edwards D. Bayer PE, et al. Among authors: chan ck. Plant Biotechnol J. 2017 Dec;15(12):1602-1610. doi: 10.1111/pbi.12742. Epub 2017 Jun 14. Plant Biotechnol J. 2017. PMID: 28403535 Free PMC article.
A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies.
Ruperao P, Chan CK, Azam S, Karafiátová M, Hayashi S, Cížková J, Saxena RK, Simková H, Song C, Vrána J, Chitikineni A, Visendi P, Gaur PM, Millán T, Singh KB, Taran B, Wang J, Batley J, Doležel J, Varshney RK, Edwards D. Ruperao P, et al. Among authors: chan ck. Plant Biotechnol J. 2014 Aug;12(6):778-86. doi: 10.1111/pbi.12182. Epub 2014 Apr 5. Plant Biotechnol J. 2014. PMID: 24702794 Free article.
An efficient approach to BAC based assembly of complex genomes.
Visendi P, Berkman PJ, Hayashi S, Golicz AA, Bayer PE, Ruperao P, Hurgobin B, Montenegro J, Chan CK, Staňková H, Batley J, Šimková H, Doležel J, Edwards D. Visendi P, et al. Among authors: chan ck. Plant Methods. 2016 Jan 20;12:2. doi: 10.1186/s13007-016-0107-9. eCollection 2016. Plant Methods. 2016. PMID: 26793268 Free PMC article.
The pangenome of an agronomically important crop plant Brassica oleracea.
Golicz AA, Bayer PE, Barker GC, Edger PP, Kim H, Martinez PA, Chan CK, Severn-Ellis A, McCombie WR, Parkin IA, Paterson AH, Pires JC, Sharpe AG, Tang H, Teakle GR, Town CD, Batley J, Edwards D. Golicz AA, et al. Among authors: chan ck. Nat Commun. 2016 Nov 11;7:13390. doi: 10.1038/ncomms13390. Nat Commun. 2016. PMID: 27834372 Free PMC article.
Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus.
Hurgobin B, Golicz AA, Bayer PE, Chan CK, Tirnaz S, Dolatabadian A, Schiessl SV, Samans B, Montenegro JD, Parkin IAP, Pires JC, Chalhoub B, King GJ, Snowdon R, Batley J, Edwards D. Hurgobin B, et al. Among authors: chan ck. Plant Biotechnol J. 2018 Jul;16(7):1265-1274. doi: 10.1111/pbi.12867. Epub 2018 Jan 10. Plant Biotechnol J. 2018. PMID: 29205771 Free PMC article.
The pangenome of hexaploid bread wheat.
Montenegro JD, Golicz AA, Bayer PE, Hurgobin B, Lee H, Chan CK, Visendi P, Lai K, Doležel J, Batley J, Edwards D. Montenegro JD, et al. Among authors: chan ck. Plant J. 2017 Jun;90(5):1007-1013. doi: 10.1111/tpj.13515. Epub 2017 Apr 5. Plant J. 2017. PMID: 28231383 Free article.
1,440 results