Hakim O - Search Results

1

Comparative analysis of T4 DNA ligases and DNA polymerases used in chromosome conformation capture assays.

Schwartz M, Sarusi A, Deitch RT, Tal M, Raz D, Sung MH, Kaplan T, Hakim O. Schwartz M, et al. Among authors: hakim o. Biotechniques. 2015 Apr 1;58(4):195-9. doi: 10.2144/000114276. eCollection 2015 Apr. Biotechniques. 2015. PMID: 25861932 Free article.

2

3D shortcuts to gene regulation.

Hakim O, Sung MH, Hager GL. Hakim O, et al. Curr Opin Cell Biol. 2010 Jun;22(3):305-13. doi: 10.1016/j.ceb.2010.04.005. Epub 2010 May 11. Curr Opin Cell Biol. 2010. PMID: 20466532 Free PMC article. Review.

3

3D view of chromosomes, DNA damage, and translocations.

Schwartz M, Hakim O. Schwartz M, et al. Among authors: hakim o. Curr Opin Genet Dev. 2014 Apr;25:118-25. doi: 10.1016/j.gde.2013.12.008. Epub 2014 Mar 12. Curr Opin Genet Dev. 2014. PMID: 24632298 Review.

4

Ep300 sequestration to functionally distinct glucocorticoid receptor binding loci underlie rapid gene activation and repression.

Portuguez AS, Grbesa I, Tal M, Deitch R, Raz D, Kliker L, Weismann R, Schwartz M, Loza O, Cohen L, Marchenkov-Flam L, Sung MH, Kaplan T, Hakim O. Portuguez AS, et al. Among authors: hakim o. Nucleic Acids Res. 2022 Jul 8;50(12):6702-6714. doi: 10.1093/nar/gkac488. Nucleic Acids Res. 2022. PMID: 35713523 Free PMC article.

5

Hierarchical role for transcription factors and chromatin structure in genome organization along adipogenesis.

Sarusi Portuguez A, Schwartz M, Siersbaek R, Nielsen R, Sung MH, Mandrup S, Kaplan T, Hakim O. Sarusi Portuguez A, et al. Among authors: hakim o. FEBS J. 2017 Oct;284(19):3230-3244. doi: 10.1111/febs.14183. Epub 2017 Aug 16. FEBS J. 2017. PMID: 28755519 Free PMC article.

6

Mapping Genome-wide Accessible Chromatin in Primary Human T Lymphocytes by ATAC-Seq.

Grbesa I, Tannenbaum M, Sarusi-Portuguez A, Schwartz M, Hakim O. Grbesa I, et al. Among authors: hakim o. J Vis Exp. 2017 Nov 13;(129):56313. doi: 10.3791/56313. J Vis Exp. 2017. PMID: 29155775 Free PMC article.

7

Cajal bodies are linked to genome conformation.

Wang Q, Sawyer IA, Sung MH, Sturgill D, Shevtsov SP, Pegoraro G, Hakim O, Baek S, Hager GL, Dundr M. Wang Q, et al. Among authors: hakim o. Nat Commun. 2016 Mar 21;7:10966. doi: 10.1038/ncomms10966. Nat Commun. 2016. PMID: 26997247 Free PMC article.

8

Diverse gene reprogramming events occur in the same spatial clusters of distal regulatory elements.

Hakim O, Sung MH, Voss TC, Splinter E, John S, Sabo PJ, Thurman RE, Stamatoyannopoulos JA, de Laat W, Hager GL. Hakim O, et al. Genome Res. 2011 May;21(5):697-706. doi: 10.1101/gr.111153.110. Epub 2011 Apr 6. Genome Res. 2011. PMID: 21471403 Free PMC article.

9

Neuronal CTCF Is Necessary for Basal and Experience-Dependent Gene Regulation, Memory Formation, and Genomic Structure of BDNF and Arc.

Sams DS, Nardone S, Getselter D, Raz D, Tal M, Rayi PR, Kaphzan H, Hakim O, Elliott E. Sams DS, et al. Among authors: hakim o. Cell Rep. 2016 Nov 22;17(9):2418-2430. doi: 10.1016/j.celrep.2016.11.004. Cell Rep. 2016. PMID: 27880914 Free article.

10

Spatial congregation of STAT binding directs selective nuclear architecture during T-cell functional differentiation.

Hakim O, Sung MH, Nakayamada S, Voss TC, Baek S, Hager GL. Hakim O, et al. Genome Res. 2013 Mar;23(3):462-72. doi: 10.1101/gr.147652.112. Epub 2012 Dec 3. Genome Res. 2013. PMID: 23212947 Free PMC article.

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