Bard J - Search Results

1

An automated method for efficient, accurate and reproducible construction of RNA-seq libraries.

Tsompana M, Valiyaparambil S, Bard J, Marzullo B, Nowak N, Buck MJ. Tsompana M, et al. Among authors: bard j. BMC Res Notes. 2015 Apr 3;8:124. doi: 10.1186/s13104-015-1089-9. BMC Res Notes. 2015. PMID: 25879881 Free PMC article.

2

ArchTEx: accurate extraction and visualization of next-generation sequence data.

Lai WK, Bard JE, Buck MJ. Lai WK, et al. Among authors: bard je. Bioinformatics. 2012 Apr 1;28(7):1021-3. doi: 10.1093/bioinformatics/bts063. Epub 2012 Feb 2. Bioinformatics. 2012. PMID: 22302569

3

Standardized collection of MNase-seq experiments enables unbiased dataset comparisons.

Rizzo JM, Bard JE, Buck MJ. Rizzo JM, et al. Among authors: bard je. BMC Mol Biol. 2012 May 6;13:15. doi: 10.1186/1471-2199-13-15. BMC Mol Biol. 2012. PMID: 22559821 Free PMC article.

4

Chromatin architectures at fission yeast transcriptional promoters and replication origins.

Givens RM, Lai WK, Rizzo JM, Bard JE, Mieczkowski PA, Leatherwood J, Huberman JA, Buck MJ. Givens RM, et al. Among authors: bard je. Nucleic Acids Res. 2012 Aug;40(15):7176-89. doi: 10.1093/nar/gks351. Epub 2012 May 9. Nucleic Acids Res. 2012. PMID: 22573177 Free PMC article.

5

Transcriptome characterization by RNA-Seq reveals the involvement of the complement components in noise-traumatized rat cochleae.

Patel M, Hu Z, Bard J, Jamison J, Cai Q, Hu BH. Patel M, et al. Among authors: bard j. Neuroscience. 2013 Sep 17;248:1-16. doi: 10.1016/j.neuroscience.2013.05.038. Epub 2013 May 30. Neuroscience. 2013. PMID: 23727008 Free PMC article.

6

FOXO1 regulates expression of a microRNA cluster on X chromosome.

Singhal R, Bard JE, Nowak NJ, Buck MJ, Kandel ES. Singhal R, et al. Among authors: bard je. Aging (Albany NY). 2013 May;5(5):347-56. doi: 10.18632/aging.100558. Aging (Albany NY). 2013. PMID: 23748164 Free PMC article.

7

Sunitinib dose escalation overcomes transient resistance in clear cell renal cell carcinoma and is associated with epigenetic modifications.

Adelaiye R, Ciamporcero E, Miles KM, Sotomayor P, Bard J, Tsompana M, Conroy D, Shen L, Ramakrishnan S, Ku SY, Orillion A, Prey J, Fetterly G, Buck M, Chintala S, Bjarnason GA, Pili R. Adelaiye R, et al. Among authors: bard j. Mol Cancer Ther. 2015 Feb;14(2):513-22. doi: 10.1158/1535-7163.MCT-14-0208. Epub 2014 Dec 17. Mol Cancer Ther. 2015. PMID: 25519701 Free PMC article.

8

Global Developmental Gene Programing Involves a Nuclear Form of Fibroblast Growth Factor Receptor-1 (FGFR1).

Terranova C, Narla ST, Lee YW, Bard J, Parikh A, Stachowiak EK, Tzanakakis ES, Buck MJ, Birkaya B, Stachowiak MK. Terranova C, et al. Among authors: bard j. PLoS One. 2015 Apr 29;10(4):e0123380. doi: 10.1371/journal.pone.0123380. eCollection 2015. PLoS One. 2015. PMID: 25923916 Free PMC article.

9

MicroRNA analysis suggests an additional level of feedback regulation in the NF-κB signaling cascade.

Mechtler P, Singhal R, Kichina JV, Bard JE, Buck MJ, Kandel ES. Mechtler P, et al. Among authors: bard je. Oncotarget. 2015 Jul 10;6(19):17097-106. doi: 10.18632/oncotarget.4005. Oncotarget. 2015. PMID: 26020802 Free PMC article.

10

High-throughput sequencing of partially edited trypanosome mRNAs reveals barriers to editing progression and evidence for alternative editing.

Simpson RM, Bruno AE, Bard JE, Buck MJ, Read LK. Simpson RM, et al. Among authors: bard je. RNA. 2016 May;22(5):677-95. doi: 10.1261/rna.055160.115. Epub 2016 Feb 23. RNA. 2016. PMID: 26908922 Free PMC article.

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