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FunRich: An open access standalone functional enrichment and interaction network analysis tool.
Pathan M, Keerthikumar S, Ang CS, Gangoda L, Quek CY, Williamson NA, Mouradov D, Sieber OM, Simpson RJ, Salim A, Bacic A, Hill AF, Stroud DA, Ryan MT, Agbinya JI, Mariadason JM, Burgess AW, Mathivanan S. Pathan M, et al. Among authors: gangoda l. Proteomics. 2015 Aug;15(15):2597-601. doi: 10.1002/pmic.201400515. Epub 2015 Jun 17. Proteomics. 2015. PMID: 25921073
Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes.
Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S. Keerthikumar S, et al. Among authors: gangoda l. Oncotarget. 2015 Jun 20;6(17):15375-96. doi: 10.18632/oncotarget.3801. Oncotarget. 2015. PMID: 25944692 Free PMC article.
ExoCarta: A Web-Based Compendium of Exosomal Cargo.
Keerthikumar S, Chisanga D, Ariyaratne D, Al Saffar H, Anand S, Zhao K, Samuel M, Pathan M, Jois M, Chilamkurti N, Gangoda L, Mathivanan S. Keerthikumar S, et al. Among authors: gangoda l. J Mol Biol. 2016 Feb 22;428(4):688-692. doi: 10.1016/j.jmb.2015.09.019. Epub 2015 Oct 3. J Mol Biol. 2016. PMID: 26434508 Free PMC article.
Colorectal cancer atlas: An integrative resource for genomic and proteomic annotations from colorectal cancer cell lines and tissues.
Chisanga D, Keerthikumar S, Pathan M, Ariyaratne D, Kalra H, Boukouris S, Mathew NA, Al Saffar H, Gangoda L, Ang CS, Sieber OM, Mariadason JM, Dasgupta R, Chilamkurti N, Mathivanan S. Chisanga D, et al. Among authors: gangoda l. Nucleic Acids Res. 2016 Jan 4;44(D1):D969-74. doi: 10.1093/nar/gkv1097. Epub 2015 Oct 22. Nucleic Acids Res. 2016. PMID: 26496946 Free PMC article.
Extending gene ontology in the context of extracellular RNA and vesicle communication.
Cheung KH, Keerthikumar S, Roncaglia P, Subramanian SL, Roth ME, Samuel M, Anand S, Gangoda L, Gould S, Alexander R, Galas D, Gerstein MB, Hill AF, Kitchen RR, Lötvall J, Patel T, Procaccini DC, Quesenberry P, Rozowsky J, Raffai RL, Shypitsyna A, Su AI, Théry C, Vickers K, Wauben MH, Mathivanan S, Milosavljevic A, Laurent LC. Cheung KH, et al. Among authors: gangoda l. J Biomed Semantics. 2016 Apr 12;7:19. doi: 10.1186/s13326-016-0061-5. eCollection 2016. J Biomed Semantics. 2016. PMID: 27076901 Free PMC article.
Bioinformatics Tools for Extracellular Vesicles Research.
Keerthikumar S, Gangoda L, Gho YS, Mathivanan S. Keerthikumar S, et al. Among authors: gangoda l. Methods Mol Biol. 2017;1545:189-196. doi: 10.1007/978-1-4939-6728-5_13. Methods Mol Biol. 2017. PMID: 27943215 Review.
31 results