Raes J - Search Results

1

Ocean plankton. Determinants of community structure in the global plankton interactome.

Lima-Mendez G, Faust K, Henry N, Decelle J, Colin S, Carcillo F, Chaffron S, Ignacio-Espinosa JC, Roux S, Vincent F, Bittner L, Darzi Y, Wang J, Audic S, Berline L, Bontempi G, Cabello AM, Coppola L, Cornejo-Castillo FM, d'Ovidio F, De Meester L, Ferrera I, Garet-Delmas MJ, Guidi L, Lara E, Pesant S, Royo-Llonch M, Salazar G, Sánchez P, Sebastian M, Souffreau C, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans coordinators; Gorsky G, Not F, Ogata H, Speich S, Stemmann L, Weissenbach J, Wincker P, Acinas SG, Sunagawa S, Bork P, Sullivan MB, Karsenti E, Bowler C, de Vargas C, Raes J. Lima-Mendez G, et al. Among authors: raes j. Science. 2015 May 22;348(6237):1262073. doi: 10.1126/science.1262073. Science. 2015. PMID: 25999517 Free article.

2

Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets.

Rehwinkel J, Letunic I, Raes J, Bork P, Izaurralde E. Rehwinkel J, et al. Among authors: raes j. RNA. 2005 Oct;11(10):1530-44. doi: 10.1261/rna.2160905. RNA. 2005. PMID: 16199763 Free PMC article.

3

Prediction of effective genome size in metagenomic samples.

Raes J, Korbel JO, Lercher MJ, von Mering C, Bork P. Raes J, et al. Genome Biol. 2007;8(1):R10. doi: 10.1186/gb-2007-8-1-r10. Genome Biol. 2007. PMID: 17224063 Free PMC article.

4

Quantitative phylogenetic assessment of microbial communities in diverse environments.

von Mering C, Hugenholtz P, Raes J, Tringe SG, Doerks T, Jensen LJ, Ward N, Bork P. von Mering C, et al. Among authors: raes j. Science. 2007 Feb 23;315(5815):1126-30. doi: 10.1126/science.1133420. Epub 2007 Feb 1. Science. 2007. PMID: 17272687 Free article.

5

Protein function space: viewing the limits or limited by our view?

Raes J, Harrington ED, Singh AH, Bork P. Raes J, et al. Curr Opin Struct Biol. 2007 Jun;17(3):362-9. doi: 10.1016/j.sbi.2007.05.010. Epub 2007 Jun 15. Curr Opin Struct Biol. 2007. PMID: 17574832 Review.

6

Get the most out of your metagenome: computational analysis of environmental sequence data.

Raes J, Foerstner KU, Bork P. Raes J, et al. Curr Opin Microbiol. 2007 Oct;10(5):490-8. doi: 10.1016/j.mib.2007.09.001. Epub 2007 Oct 23. Curr Opin Microbiol. 2007. PMID: 17936679 Review.

7

Molecular eco-systems biology: towards an understanding of community function.

Raes J, Bork P. Raes J, et al. Nat Rev Microbiol. 2008 Sep;6(9):693-9. doi: 10.1038/nrmicro1935. Nat Rev Microbiol. 2008. PMID: 18587409 Review.

8

Discovering functional novelty in metagenomes: examples from light-mediated processes.

Singh AH, Doerks T, Letunic I, Raes J, Bork P. Singh AH, et al. Among authors: raes j. J Bacteriol. 2009 Jan;191(1):32-41. doi: 10.1128/JB.01084-08. Epub 2008 Oct 10. J Bacteriol. 2009. PMID: 18849420 Free PMC article. Review.

9

A nitrile hydratase in the eukaryote Monosiga brevicollis.

Foerstner KU, Doerks T, Muller J, Raes J, Bork P. Foerstner KU, et al. Among authors: raes j. PLoS One. 2008;3(12):e3976. doi: 10.1371/journal.pone.0003976. Epub 2008 Dec 19. PLoS One. 2008. PMID: 19096720 Free PMC article.

10

SmashCommunity: a metagenomic annotation and analysis tool.

Arumugam M, Harrington ED, Foerstner KU, Raes J, Bork P. Arumugam M, et al. Among authors: raes j. Bioinformatics. 2010 Dec 1;26(23):2977-8. doi: 10.1093/bioinformatics/btq536. Epub 2010 Oct 19. Bioinformatics. 2010. PMID: 20959381

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