Jepsen K - Search Results

1

Systematic transcriptome analysis reveals tumor-specific isoforms for ovarian cancer diagnosis and therapy.

Barrett CL, DeBoever C, Jepsen K, Saenz CC, Carson DA, Frazer KA. Barrett CL, et al. Among authors: jepsen k. Proc Natl Acad Sci U S A. 2015 Jun 9;112(23):E3050-7. doi: 10.1073/pnas.1508057112. Epub 2015 May 26. Proc Natl Acad Sci U S A. 2015. PMID: 26015570 Free PMC article.

2

Mutascope: sensitive detection of somatic mutations from deep amplicon sequencing.

Yost SE, Alakus H, Matsui H, Schwab RB, Jepsen K, Frazer KA, Harismendy O. Yost SE, et al. Among authors: jepsen k. Bioinformatics. 2013 Aug 1;29(15):1908-9. doi: 10.1093/bioinformatics/btt305. Epub 2013 May 27. Bioinformatics. 2013. PMID: 23712659 Free PMC article.

3

Identification of liver cancer progenitors whose malignant progression depends on autocrine IL-6 signaling.

He G, Dhar D, Nakagawa H, Font-Burgada J, Ogata H, Jiang Y, Shalapour S, Seki E, Yost SE, Jepsen K, Frazer KA, Harismendy O, Hatziapostolou M, Iliopoulos D, Suetsugu A, Hoffman RM, Tateishi R, Koike K, Karin M. He G, et al. Among authors: jepsen k. Cell. 2013 Oct 10;155(2):384-96. doi: 10.1016/j.cell.2013.09.031. Cell. 2013. PMID: 24120137 Free PMC article.

4

Evaluation of ultra-deep targeted sequencing for personalized breast cancer care.

Harismendy O, Schwab RB, Alakus H, Yost SE, Matsui H, Hasteh F, Wallace AM, Park HL, Madlensky L, Parker B, Carpenter PM, Jepsen K, Anton-Culver H, Frazer KA. Harismendy O, et al. Among authors: jepsen k. Breast Cancer Res. 2013 Dec 10;15(6):R115. doi: 10.1186/bcr3584. Breast Cancer Res. 2013. PMID: 24326041 Free PMC article.

5

Genetic ancestry of participants in the National Children's Study.

Smith EN, Jepsen K, Arias AD, Shepard PJ, Chambers CD, Frazer KA. Smith EN, et al. Among authors: jepsen k. Genome Biol. 2014 Feb 3;15(2):R22. doi: 10.1186/gb-2014-15-2-r22. Genome Biol. 2014. PMID: 24490717 Free PMC article.

6

miR-150 influences B-cell receptor signaling in chronic lymphocytic leukemia by regulating expression of GAB1 and FOXP1.

Mraz M, Chen L, Rassenti LZ, Ghia EM, Li H, Jepsen K, Smith EN, Messer K, Frazer KA, Kipps TJ. Mraz M, et al. Among authors: jepsen k. Blood. 2014 Jul 3;124(1):84-95. doi: 10.1182/blood-2013-09-527234. Epub 2014 May 1. Blood. 2014. PMID: 24787006 Free PMC article.

7

Effective filtering strategies to improve data quality from population-based whole exome sequencing studies.

Carson AR, Smith EN, Matsui H, Brækkan SK, Jepsen K, Hansen JB, Frazer KA. Carson AR, et al. Among authors: jepsen k. BMC Bioinformatics. 2014 May 2;15:125. doi: 10.1186/1471-2105-15-125. BMC Bioinformatics. 2014. PMID: 24884706 Free PMC article.

8

Genome-wide mutational landscape of mucinous carcinomatosis peritonei of appendiceal origin.

Alakus H, Babicky ML, Ghosh P, Yost S, Jepsen K, Dai Y, Arias A, Samuels ML, Mose ES, Schwab RB, Peterson MR, Lowy AM, Frazer KA, Harismendy O. Alakus H, et al. Among authors: jepsen k. Genome Med. 2014 May 29;6(5):43. doi: 10.1186/gm559. eCollection 2014. Genome Med. 2014. PMID: 24944587 Free PMC article.

9

Biased estimates of clonal evolution and subclonal heterogeneity can arise from PCR duplicates in deep sequencing experiments.

Smith EN, Jepsen K, Khosroheidari M, Rassenti LZ, D'Antonio M, Ghia EM, Carson DA, Jamieson CH, Kipps TJ, Frazer KA. Smith EN, et al. Among authors: jepsen k. Genome Biol. 2014 Aug 7;15(8):420. doi: 10.1186/s13059-014-0420-4. Genome Biol. 2014. PMID: 25103687 Free PMC article.

10

Correction: Genome-wide mutational landscape of mucinous carcinomatosis peritonei of appendiceal origin.

Alakus H, Babicky ML, Ghosh P, Yost S, Jepsen K, Dai Y, Arias A, Samuels ML, Mose ES, Schwab RB, Peterson MR, Lowy AM, Frazer KA, Harismendy O. Alakus H, et al. Among authors: jepsen k. Genome Med. 2014 Jul 26;6(7):53. doi: 10.1186/s13073-014-0053-y. eCollection 2014. Genome Med. 2014. PMID: 25228923 Free PMC article. No abstract available.

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