Facchiano A - Search Results

1

Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics.

Facchiano A, Angelini C, Bosotti R, Guffanti A, Marabotti A, Marangoni R, Pascarella S, Romano P, Zanzoni A, Helmer-Citterich M. Facchiano A, et al. BMC Bioinformatics. 2015;16 Suppl 9(Suppl 9):S1. doi: 10.1186/1471-2105-16-S9-S1. Epub 2015 Jun 1. BMC Bioinformatics. 2015. PMID: 26050789 Free PMC article.

2

Homology modeling studies on human galactose-1-phosphate uridylyltransferase and on its galactosemia-related mutant Q188R provide an explanation of molecular effects of the mutation on homo- and heterodimers.

Marabotti A, Facchiano AM. Marabotti A, et al. Among authors: facchiano am. J Med Chem. 2005 Feb 10;48(3):773-9. doi: 10.1021/jm049731q. J Med Chem. 2005. PMID: 15689161

3

New computational strategy to analyze the interactions of ERalpha and ERbeta with different ERE sequences.

Marabotti A, Colonna G, Facchiano A. Marabotti A, et al. Among authors: facchiano a. J Comput Chem. 2007 Apr 30;28(6):1031-41. doi: 10.1002/jcc.20582. J Comput Chem. 2007. PMID: 17269124

4

Energy-based prediction of amino acid-nucleotide base recognition.

Marabotti A, Spyrakis F, Facchiano A, Cozzini P, Alberti S, Kellogg GE, Mozzarelli A. Marabotti A, et al. Among authors: facchiano a. J Comput Chem. 2008 Sep;29(12):1955-69. doi: 10.1002/jcc.20954. J Comput Chem. 2008. PMID: 18366021

5

Time-course analysis of genome-wide gene expression data from hormone-responsive human breast cancer cells.

Mutarelli M, Cicatiello L, Ferraro L, Grober OM, Ravo M, Facchiano AM, Angelini C, Weisz A. Mutarelli M, et al. Among authors: facchiano am. BMC Bioinformatics. 2008 Mar 26;9 Suppl 2(Suppl 2):S12. doi: 10.1186/1471-2105-9-S2-S12. BMC Bioinformatics. 2008. PMID: 18387200 Free PMC article.

6

When it comes to homology, bad habits die hard.

Marabotti A, Facchiano A. Marabotti A, et al. Among authors: facchiano a. Trends Biochem Sci. 2009 Mar;34(3):98-9. doi: 10.1016/j.tibs.2008.12.001. Epub 2009 Jan 30. Trends Biochem Sci. 2009. PMID: 19181528 No abstract available.

7

GALT protein database, a bioinformatics resource for the management and analysis of structural features of a galactosemia-related protein and its mutants.

d'Acierno A, Facchiano A, Marabotti A. d'Acierno A, et al. Among authors: facchiano a. Genomics Proteomics Bioinformatics. 2009 Jun;7(1-2):71-6. doi: 10.1016/S1672-0229(08)60035-2. Genomics Proteomics Bioinformatics. 2009. PMID: 19591794 Free PMC article.

8

Analysis of galactosemia-linked mutations of GALT enzyme using a computational biology approach.

Facchiano A, Marabotti A. Facchiano A, et al. Protein Eng Des Sel. 2010 Feb;23(2):103-13. doi: 10.1093/protein/gzp076. Epub 2009 Dec 11. Protein Eng Des Sel. 2010. PMID: 20008339

9

The misuse of terms in scientific literature.

Marabotti A, Facchiano A. Marabotti A, et al. Among authors: facchiano a. Bioinformatics. 2010 Oct 1;26(19):2498. doi: 10.1093/bioinformatics/btq438. Epub 2010 Aug 9. Bioinformatics. 2010. PMID: 20696735 No abstract available.

10

Critical assessment of side chain conformation prediction in modelling of single point amino acid mutation.

Marabotti A, Facchiano A. Marabotti A, et al. Among authors: facchiano a. Adv Exp Med Biol. 2010;680:283-9. doi: 10.1007/978-1-4419-5913-3_32. Adv Exp Med Biol. 2010. PMID: 20865511

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