Stone JE - Search Results

1

Runtime and Architecture Support for Efficient Data Exchange in Multi-Accelerator Applications.

Cabezas J, Gelado I, Stone JE, Navarro N, Kirk DB, Hwu WM. Cabezas J, et al. Among authors: stone je. IEEE Trans Parallel Distrib Syst. 2015 May 1;26(5):1405-1418. doi: 10.1109/TPDS.2014.2316825. IEEE Trans Parallel Distrib Syst. 2015. PMID: 26180487 Free PMC article.

2

Evaluation of Emerging Energy-Efficient Heterogeneous Computing Platforms for Biomolecular and Cellular Simulation Workloads.

Stone JE, Hallock MJ, Phillips JC, Peterson JR, Luthey-Schulten Z, Schulten K. Stone JE, et al. IEEE Int Symp Parallel Distrib Process Workshops Phd Forum. 2016 May;2016:89-100. doi: 10.1109/IPDPSW.2016.130. IEEE Int Symp Parallel Distrib Process Workshops Phd Forum. 2016. PMID: 27516922 Free PMC article.

3

Multilevel Summation of Electrostatic Potentials Using Graphics Processing Units.

Hardy DJ, Stone JE, Schulten K. Hardy DJ, et al. Among authors: stone je. Parallel Comput. 2009 Mar 1;35(3):164-177. doi: 10.1016/j.parco.2008.12.005. Parallel Comput. 2009. PMID: 20161132 Free PMC article.

4

Simulation of reaction diffusion processes over biologically relevant size and time scales using multi-GPU workstations.

Hallock MJ, Stone JE, Roberts E, Fry C, Luthey-Schulten Z. Hallock MJ, et al. Among authors: stone je. Parallel Comput. 2014 May 1;40(5-6):86-99. doi: 10.1016/j.parco.2014.03.009. Parallel Comput. 2014. PMID: 24882911 Free PMC article.

5

High Performance Molecular Visualization: In-Situ and Parallel Rendering with EGL.

Stone JE, Messmer P, Sisneros R, Schulten K. Stone JE, et al. IEEE Int Symp Parallel Distrib Process Workshops Phd Forum. 2016 May;2016:1014-1023. doi: 10.1109/IPDPSW.2016.127. Epub 2016 Aug 4. IEEE Int Symp Parallel Distrib Process Workshops Phd Forum. 2016. PMID: 27747137 Free PMC article.

6

Immersive Molecular Visualization with Omnidirectional Stereoscopic Ray Tracing and Remote Rendering.

Stone JE, Sherman WR, Schulten K. Stone JE, et al. IEEE Int Symp Parallel Distrib Process Workshops Phd Forum. 2016 May;2016:1048-1057. doi: 10.1109/IPDPSW.2016.121. Epub 2016 Aug 4. IEEE Int Symp Parallel Distrib Process Workshops Phd Forum. 2016. PMID: 27747138 Free PMC article.

7

Accelerating molecular modeling applications with graphics processors.

Stone JE, Phillips JC, Freddolino PL, Hardy DJ, Trabuco LG, Schulten K. Stone JE, et al. J Comput Chem. 2007 Dec;28(16):2618-40. doi: 10.1002/jcc.20829. J Comput Chem. 2007. PMID: 17894371

8

OpenCL: A Parallel Programming Standard for Heterogeneous Computing Systems.

Stone JE, Gohara D, Shi G. Stone JE, et al. Comput Sci Eng. 2010 May;12(3):66-72. doi: 10.1109/MCSE.2010.69. Comput Sci Eng. 2010. PMID: 21037981 Free PMC article.

9

Atomic Detail Visualization of Photosynthetic Membranes with GPU-Accelerated Ray Tracing.

Stone JE, Sener M, Vandivort KL, Barragan A, Singharoy A, Teo I, Ribeiro JV, Isralewitz B, Liu B, Goh BC, Phillips JC, MacGregor-Chatwin C, Johnson MP, Kourkoutis LF, Hunter CN, Schulten K. Stone JE, et al. Parallel Comput. 2016 Jul;55:17-27. doi: 10.1016/j.parco.2015.10.015. Parallel Comput. 2016. PMID: 27274603 Free PMC article.

10

Scalable Molecular Dynamics with NAMD on the Summit System.

Acun B, Hardy DJ, Kale LV, Li K, Phillips JC, Stone JE. Acun B, et al. Among authors: stone je. IBM J Res Dev. 2018 Nov-Dec;62(6):1-9. doi: 10.1147/jrd.2018.2888986. Epub 2018 Dec 21. IBM J Res Dev. 2018. PMID: 32154805 Free PMC article.

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