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Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri.
Connor TR, Barker CR, Baker KS, Weill FX, Talukder KA, Smith AM, Baker S, Gouali M, Pham Thanh D, Jahan Azmi I, Dias da Silveira W, Semmler T, Wieler LH, Jenkins C, Cravioto A, Faruque SM, Parkhill J, Wook Kim D, Keddy KH, Thomson NR. Connor TR, et al. Among authors: jenkins c. Elife. 2015 Aug 4;4:e07335. doi: 10.7554/eLife.07335. Elife. 2015. PMID: 26238191 Free PMC article.
Retrospective analysis of whole genome sequencing compared to prospective typing data in further informing the epidemiological investigation of an outbreak of Shigella sonnei in the UK.
McDonnell J, Dallman T, Atkin S, Turbitt DA, Connor TR, Grant KA, Thomson NR, Jenkins C. McDonnell J, et al. Among authors: jenkins c. Epidemiol Infect. 2013 Dec;141(12):2568-75. doi: 10.1017/S0950268813000137. Epub 2013 Feb 21. Epidemiol Infect. 2013. PMID: 23425681 Free PMC article.
Use of whole-genus genome sequence data to develop a multilocus sequence typing tool that accurately identifies Yersinia isolates to the species and subspecies levels.
Hall M, Chattaway MA, Reuter S, Savin C, Strauch E, Carniel E, Connor T, Van Damme I, Rajakaruna L, Rajendram D, Jenkins C, Thomson NR, McNally A. Hall M, et al. Among authors: jenkins c. J Clin Microbiol. 2015 Jan;53(1):35-42. doi: 10.1128/JCM.02395-14. Epub 2014 Oct 22. J Clin Microbiol. 2015. PMID: 25339391 Free PMC article.
Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study.
Baker KS, Dallman TJ, Ashton PM, Day M, Hughes G, Crook PD, Gilbart VL, Zittermann S, Allen VG, Howden BP, Tomita T, Valcanis M, Harris SR, Connor TR, Sintchenko V, Howard P, Brown JD, Petty NK, Gouali M, Thanh DP, Keddy KH, Smith AM, Talukder KA, Faruque SM, Parkhill J, Baker S, Weill FX, Jenkins C, Thomson NR. Baker KS, et al. Among authors: jenkins c. Lancet Infect Dis. 2015 Aug;15(8):913-21. doi: 10.1016/S1473-3099(15)00002-X. Epub 2015 Apr 27. Lancet Infect Dis. 2015. PMID: 25936611
Evaluation of Molecular Methods for Serotyping Shigella flexneri.
Gentle A, Ashton PM, Dallman TJ, Jenkins C. Gentle A, et al. Among authors: jenkins c. J Clin Microbiol. 2016 Jun;54(6):1456-1461. doi: 10.1128/JCM.03386-15. Epub 2016 Mar 16. J Clin Microbiol. 2016. PMID: 26984974 Free PMC article.
Travel- and Community-Based Transmission of Multidrug-Resistant Shigella sonnei Lineage among International Orthodox Jewish Communities.
Baker KS, Dallman TJ, Behar A, Weill FX, Gouali M, Sobel J, Fookes M, Valinsky L, Gal-Mor O, Connor TR, Nissan I, Bertrand S, Parkhill J, Jenkins C, Cohen D, Thomson NR. Baker KS, et al. Among authors: jenkins c. Emerg Infect Dis. 2016 Sep;22(9):1545-53. doi: 10.3201/eid2209.151953. Emerg Infect Dis. 2016. PMID: 27532625 Free PMC article.
Global phylogeography and evolutionary history of Shigella dysenteriae type 1.
Njamkepo E, Fawal N, Tran-Dien A, Hawkey J, Strockbine N, Jenkins C, Talukder KA, Bercion R, Kuleshov K, Kolínská R, Russell JE, Kaftyreva L, Accou-Demartin M, Karas A, Vandenberg O, Mather AE, Mason CJ, Page AJ, Ramamurthy T, Bizet C, Gamian A, Carle I, Sow AG, Bouchier C, Wester AL, Lejay-Collin M, Fonkoua MC, Le Hello S, Blaser MJ, Jernberg C, Ruckly C, Mérens A, Page AL, Aslett M, Roggentin P, Fruth A, Denamur E, Venkatesan M, Bercovier H, Bodhidatta L, Chiou CS, Clermont D, Colonna B, Egorova S, Pazhani GP, Ezernitchi AV, Guigon G, Harris SR, Izumiya H, Korzeniowska-Kowal A, Lutyńska A, Gouali M, Grimont F, Langendorf C, Marejková M, Peterson LA, Perez-Perez G, Ngandjio A, Podkolzin A, Souche E, Makarova M, Shipulin GA, Ye C, Žemličková H, Herpay M, Grimont PA, Parkhill J, Sansonetti P, Holt KE, Brisse S, Thomson NR, Weill FX. Njamkepo E, et al. Among authors: jenkins c. Nat Microbiol. 2016 Mar 21;1:16027. doi: 10.1038/nmicrobiol.2016.27. Nat Microbiol. 2016. PMID: 27572446
2,101 results