Li D - Search Results

1

Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.

Fedeles BI, Freudenthal BD, Yau E, Singh V, Chang SC, Li D, Delaney JC, Wilson SH, Essigmann JM. Fedeles BI, et al. Among authors: li d. Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):E4571-80. doi: 10.1073/pnas.1507709112. Epub 2015 Aug 4. Proc Natl Acad Sci U S A. 2015. PMID: 26243878 Free PMC article.

2

Chemical biology of mutagenesis and DNA repair: cellular responses to DNA alkylation.

Shrivastav N, Li D, Essigmann JM. Shrivastav N, et al. Among authors: li d. Carcinogenesis. 2010 Jan;31(1):59-70. doi: 10.1093/carcin/bgp262. Epub 2009 Oct 29. Carcinogenesis. 2010. PMID: 19875697 Free PMC article. Review.

3

Repair of DNA Alkylation Damage by the Escherichia coli Adaptive Response Protein AlkB as Studied by ESI-TOF Mass Spectrometry.

Li D, Delaney JC, Page CM, Chen AS, Wong C, Drennan CL, Essigmann JM. Li D, et al. J Nucleic Acids. 2010 Oct 27;2010:369434. doi: 10.4061/2010/369434. J Nucleic Acids. 2010. PMID: 21048928 Free PMC article.

4

Mutation of HIV-1 genomes in a clinical population treated with the mutagenic nucleoside KP1461.

Mullins JI, Heath L, Hughes JP, Kicha J, Styrchak S, Wong KG, Rao U, Hansen A, Harris KS, Laurent JP, Li D, Simpson JH, Essigmann JM, Loeb LA, Parkins J. Mullins JI, et al. Among authors: li d. PLoS One. 2011 Jan 14;6(1):e15135. doi: 10.1371/journal.pone.0015135. PLoS One. 2011. PMID: 21264288 Free PMC article. Clinical Trial.

5

Exocyclic carbons adjacent to the N6 of adenine are targets for oxidation by the Escherichia coli adaptive response protein AlkB.

Li D, Delaney JC, Page CM, Yang X, Chen AS, Wong C, Drennan CL, Essigmann JM. Li D, et al. J Am Chem Soc. 2012 May 30;134(21):8896-901. doi: 10.1021/ja3010094. Epub 2012 May 21. J Am Chem Soc. 2012. PMID: 22512456 Free PMC article.

6

Removal of N-alkyl modifications from N(2)-alkylguanine and N(4)-alkylcytosine in DNA by the adaptive response protein AlkB.

Li D, Fedeles BI, Shrivastav N, Delaney JC, Yang X, Wong C, Drennan CL, Essigmann JM. Li D, et al. Chem Res Toxicol. 2013 Aug 19;26(8):1182-7. doi: 10.1021/tx400096m. Epub 2013 Jul 10. Chem Res Toxicol. 2013. PMID: 23773213 Free PMC article.

7

Direct observation of multiple tautomers of oxythiamine and their recognition by the thiamine pyrophosphate riboswitch.

Singh V, Peng CS, Li D, Mitra K, Silvestre KJ, Tokmakoff A, Essigmann JM. Singh V, et al. Among authors: li d. ACS Chem Biol. 2014 Jan 17;9(1):227-36. doi: 10.1021/cb400581f. Epub 2013 Nov 19. ACS Chem Biol. 2014. PMID: 24252063 Free PMC article.

8

Molecular recognition using corona phase complexes made of synthetic polymers adsorbed on carbon nanotubes.

Zhang J, Landry MP, Barone PW, Kim JH, Lin S, Ulissi ZW, Lin D, Mu B, Boghossian AA, Hilmer AJ, Rwei A, Hinckley AC, Kruss S, Shandell MA, Nair N, Blake S, Şen F, Şen S, Croy RG, Li D, Yum K, Ahn JH, Jin H, Heller DA, Essigmann JM, Blankschtein D, Strano MS. Zhang J, et al. Among authors: li d. Nat Nanotechnol. 2013 Dec;8(12):959-68. doi: 10.1038/nnano.2013.236. Epub 2013 Nov 24. Nat Nanotechnol. 2013. PMID: 24270641 Free PMC article.

9

A chemical genetics analysis of the roles of bypass polymerase DinB and DNA repair protein AlkB in processing N2-alkylguanine lesions in vivo.

Shrivastav N, Fedeles BI, Li D, Delaney JC, Frick LE, Foti JJ, Walker GC, Essigmann JM. Shrivastav N, et al. Among authors: li d. PLoS One. 2014 Apr 14;9(4):e94716. doi: 10.1371/journal.pone.0094716. eCollection 2014. PLoS One. 2014. PMID: 24733044 Free PMC article.

10

Tautomerism provides a molecular explanation for the mutagenic properties of the anti-HIV nucleoside 5-aza-5,6-dihydro-2'-deoxycytidine.

Li D, Fedeles BI, Singh V, Peng CS, Silvestre KJ, Simi AK, Simpson JH, Tokmakoff A, Essigmann JM. Li D, et al. Proc Natl Acad Sci U S A. 2014 Aug 12;111(32):E3252-9. doi: 10.1073/pnas.1405635111. Epub 2014 Jul 28. Proc Natl Acad Sci U S A. 2014. PMID: 25071207 Free PMC article.

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