Perera L - Search Results

1

Requirement for transient metal ions revealed through computational analysis for DNA polymerase going in reverse.

Perera L, Freudenthal BD, Beard WA, Shock DD, Pedersen LG, Wilson SH. Perera L, et al. Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):E5228-36. doi: 10.1073/pnas.1511207112. Epub 2015 Sep 8. Proc Natl Acad Sci U S A. 2015. PMID: 26351676 Free PMC article.

2

Prediction of solution structures of the Ca2+-bound gamma-carboxyglutamic acid domains of protein S and homolog growth arrest specific protein 6: use of the particle mesh Ewald method.

Perera L, Li L, Darden T, Monroe DM, Pedersen LG. Perera L, et al. Biophys J. 1997 Oct;73(4):1847-56. doi: 10.1016/S0006-3495(97)78215-8. Biophys J. 1997. PMID: 9336180 Free PMC article.

3

Trans-cis isomerization of proline 22 in bovine prothrombin fragment 1: a surprising result of structural characterization.

Perera L, Darden TA, Pedersen LG. Perera L, et al. Biochemistry. 1998 Aug 4;37(31):10920-7. doi: 10.1021/bi980263u. Biochemistry. 1998. PMID: 9692984

4

New tricks for modelers from the crystallography toolkit: the particle mesh Ewald algorithm and its use in nucleic acid simulations.

Darden T, Perera L, Li L, Pedersen L. Darden T, et al. Among authors: perera l. Structure. 1999 Mar 15;7(3):R55-60. doi: 10.1016/s0969-2126(99)80033-1. Structure. 1999. PMID: 10368306 Free article. Review. No abstract available.

5

Probing the structural changes in the light chain of human coagulation factor VIIa due to tissue factor association.

Perera L, Darden TA, Pedersen LG. Perera L, et al. Biophys J. 1999 Jul;77(1):99-113. doi: 10.1016/S0006-3495(99)76875-X. Biophys J. 1999. PMID: 10388743 Free PMC article.

6

Heparan sulfate biosynthesis: a theoretical study of the initial sulfation step by N-deacetylase/N-sulfotransferase.

Gorokhov A, Perera L, Darden TA, Negishi M, Pedersen LC, Pedersen LG. Gorokhov A, et al. Among authors: perera l. Biophys J. 2000 Dec;79(6):2909-17. doi: 10.1016/S0006-3495(00)76528-3. Biophys J. 2000. PMID: 11106599 Free PMC article.

7

Modeling zymogen protein C.

Perera L, Foley C, Darden TA, Stafford D, Mather T, Esmon CT, Pedersen LG. Perera L, et al. Biophys J. 2000 Dec;79(6):2925-43. doi: 10.1016/S0006-3495(00)76530-1. Biophys J. 2000. PMID: 11106601 Free PMC article.

8

Four loops of the catalytic domain of factor viia mediate the effect of the first EGF-like domain substitution on factor viia catalytic activity.

Jin J, Perera L, Stafford D, Pedersen L. Jin J, et al. Among authors: perera l. J Mol Biol. 2001 Apr 13;307(5):1503-17. doi: 10.1006/jmbi.2001.4556. J Mol Biol. 2001. PMID: 11292356

9

Modeling human zymogen factor IX.

Perera L, Darden TA, Pedersen LG. Perera L, et al. Thromb Haemost. 2001 Apr;85(4):596-603. Thromb Haemost. 2001. PMID: 11341491

10

Structure and dynamics of zymogen human blood coagulation factor X.

Venkateswarlu D, Perera L, Darden T, Pedersen LG. Venkateswarlu D, et al. Among authors: perera l. Biophys J. 2002 Mar;82(3):1190-206. doi: 10.1016/S0006-3495(02)75476-3. Biophys J. 2002. PMID: 11867437 Free PMC article.

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