Kiselev VY - Search Results

1

Perturbations of PIP3 signalling trigger a global remodelling of mRNA landscape and reveal a transcriptional feedback loop.

Kiselev VY, Juvin V, Malek M, Luscombe N, Hawkins P, Le Novère N, Stephens L. Kiselev VY, et al. Nucleic Acids Res. 2015 Nov 16;43(20):9663-79. doi: 10.1093/nar/gkv1015. Epub 2015 Oct 12. Nucleic Acids Res. 2015. PMID: 26464442 Free PMC article.

2

PTEN Regulates PI(3,4)P₂ Signaling Downstream of Class I PI3K.

Malek M, Kielkowska A, Chessa T, Anderson KE, Barneda D, Pir P, Nakanishi H, Eguchi S, Koizumi A, Sasaki J, Juvin V, Kiselev VY, Niewczas I, Gray A, Valayer A, Spensberger D, Imbert M, Felisbino S, Habuchi T, Beinke S, Cosulich S, Le Novère N, Sasaki T, Clark J, Hawkins PT, Stephens LR. Malek M, et al. Among authors: kiselev vy. Mol Cell. 2017 Nov 2;68(3):566-580.e10. doi: 10.1016/j.molcel.2017.09.024. Epub 2017 Oct 19. Mol Cell. 2017. PMID: 29056325 Free PMC article.

3

Tia1 dependent regulation of mRNA subcellular location and translation controls p53 expression in B cells.

Díaz-Muñoz MD, Kiselev VY, Le Novère N, Curk T, Ule J, Turner M. Díaz-Muñoz MD, et al. Among authors: kiselev vy. Nat Commun. 2017 Sep 13;8(1):530. doi: 10.1038/s41467-017-00454-2. Nat Commun. 2017. PMID: 28904350 Free PMC article.

4

Flexible comparison of batch correction methods for single-cell RNA-seq using BatchBench.

Chazarra-Gil R, van Dongen S, Kiselev VY, Hemberg M. Chazarra-Gil R, et al. Among authors: kiselev vy. Nucleic Acids Res. 2021 Apr 19;49(7):e42. doi: 10.1093/nar/gkab004. Nucleic Acids Res. 2021. PMID: 33524142 Free PMC article.

5

scmap: projection of single-cell RNA-seq data across data sets.

Kiselev VY, Yiu A, Hemberg M. Kiselev VY, et al. Nat Methods. 2018 May;15(5):359-362. doi: 10.1038/nmeth.4644. Epub 2018 Apr 2. Nat Methods. 2018. PMID: 29608555

6

Challenges in unsupervised clustering of single-cell RNA-seq data.

Kiselev VY, Andrews TS, Hemberg M. Kiselev VY, et al. Nat Rev Genet. 2019 May;20(5):273-282. doi: 10.1038/s41576-018-0088-9. Nat Rev Genet. 2019. PMID: 30617341 Review.

7

Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data.

Andrews TS, Kiselev VY, McCarthy D, Hemberg M. Andrews TS, et al. Among authors: kiselev vy. Nat Protoc. 2021 Jan;16(1):1-9. doi: 10.1038/s41596-020-00409-w. Epub 2020 Dec 7. Nat Protoc. 2021. PMID: 33288955 Review.

8

Comparison of visualization tools for single-cell RNAseq data.

Cakir B, Prete M, Huang N, van Dongen S, Pir P, Kiselev VY. Cakir B, et al. Among authors: kiselev vy. NAR Genom Bioinform. 2020 Sep;2(3):lqaa052. doi: 10.1093/nargab/lqaa052. Epub 2020 Jul 29. NAR Genom Bioinform. 2020. PMID: 32766548 Free PMC article.

9

Proliferation Drives Aging-Related Functional Decline in a Subpopulation of the Hematopoietic Stem Cell Compartment.

Kirschner K, Chandra T, Kiselev V, Flores-Santa Cruz D, Macaulay IC, Park HJ, Li J, Kent DG, Kumar R, Pask DC, Hamilton TL, Hemberg M, Reik W, Green AR. Kirschner K, et al. Cell Rep. 2017 May 23;19(8):1503-1511. doi: 10.1016/j.celrep.2017.04.074. Cell Rep. 2017. PMID: 28538171 Free PMC article.

10

Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro.

Garcia-Alonso L, Handfield LF, Roberts K, Nikolakopoulou K, Fernando RC, Gardner L, Woodhams B, Arutyunyan A, Polanski K, Hoo R, Sancho-Serra C, Li T, Kwakwa K, Tuck E, Lorenzi V, Massalha H, Prete M, Kleshchevnikov V, Tarkowska A, Porter T, Mazzeo CI, van Dongen S, Dabrowska M, Vaskivskyi V, Mahbubani KT, Park JE, Jimenez-Linan M, Campos L, Kiselev VY, Lindskog C, Ayuk P, Prigmore E, Stratton MR, Saeb-Parsy K, Moffett A, Moore L, Bayraktar OA, Teichmann SA, Turco MY, Vento-Tormo R. Garcia-Alonso L, et al. Among authors: kiselev vy. Nat Genet. 2021 Dec;53(12):1698-1711. doi: 10.1038/s41588-021-00972-2. Epub 2021 Dec 2. Nat Genet. 2021. PMID: 34857954 Free PMC article.

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