Vilchez-Vargas R - Search Results

1

Degradation of Benzene by Pseudomonas veronii 1YdBTEX2 and 1YB2 Is Catalyzed by Enzymes Encoded in Distinct Catabolism Gene Clusters.

de Lima-Morales D, Chaves-Moreno D, Wos-Oxley ML, Jáuregui R, Vilchez-Vargas R, Pieper DH. de Lima-Morales D, et al. Appl Environ Microbiol. 2015 Oct 16;82(1):167-73. doi: 10.1128/AEM.03026-15. Print 2016 Jan 1. Appl Environ Microbiol. 2015. PMID: 26475106 Free PMC article.

2

Degradation of chloroaromatics by Pseudomonas putida GJ31: assembled route for chlorobenzene degradation encoded by clusters on plasmid pKW1 and the chromosome.

Kunze M, Zerlin KF, Retzlaff A, Pohl JO, Schmidt E, Janssen DB, Vilchez-Vargas R, Pieper DH, Reineke W. Kunze M, et al. Microbiology (Reading). 2009 Dec;155(Pt 12):4069-4083. doi: 10.1099/mic.0.032110-0. Epub 2009 Sep 10. Microbiology (Reading). 2009. PMID: 19744988 Free article.

3

Metabolic networks, microbial ecology and 'omics' technologies: towards understanding in situ biodegradation processes.

Vilchez-Vargas R, Junca H, Pieper DH. Vilchez-Vargas R, et al. Environ Microbiol. 2010 Dec;12(12):3089-104. doi: 10.1111/j.1462-2920.2010.02340.x. Epub 2010 Sep 23. Environ Microbiol. 2010. PMID: 20860734 Review.

4

Analysis of the microbial gene landscape and transcriptome for aromatic pollutants and alkane degradation using a novel internally calibrated microarray system.

Vilchez-Vargas R, Geffers R, Suárez-Diez M, Conte I, Waliczek A, Kaser VS, Kralova M, Junca H, Pieper DH. Vilchez-Vargas R, et al. Environ Microbiol. 2013 Apr;15(4):1016-39. doi: 10.1111/j.1462-2920.2012.02752.x. Epub 2012 Apr 20. Environ Microbiol. 2013. PMID: 22515215

5

Draft Genome Sequence of Pseudomonas veronii Strain 1YdBTEX2.

de Lima-Morales D, Chaves-Moreno D, Jarek M, Vilchez-Vargas R, Jauregui R, Pieper DH. de Lima-Morales D, et al. Genome Announc. 2013 May 16;1(3):e00258-13. doi: 10.1128/genomeA.00258-13. Genome Announc. 2013. PMID: 23682152 Free PMC article.

6

High-resolution taxonomic profiling of the subgingival microbiome for biomarker discovery and periodontitis diagnosis.

Szafranski SP, Wos-Oxley ML, Vilchez-Vargas R, Jáuregui R, Plumeier I, Klawonn F, Tomasch J, Meisinger C, Kühnisch J, Sztajer H, Pieper DH, Wagner-Döbler I. Szafranski SP, et al. Appl Environ Microbiol. 2015 Feb;81(3):1047-58. doi: 10.1128/AEM.03534-14. Epub 2014 Dec 1. Appl Environ Microbiol. 2015. PMID: 25452281 Free PMC article.

7

Linking Microbial Community and Catabolic Gene Structures during the Adaptation of Three Contaminated Soils under Continuous Long-Term Pollutant Stress.

Lima-Morales D, Jáuregui R, Camarinha-Silva A, Geffers R, Pieper DH, Vilchez-Vargas R. Lima-Morales D, et al. Appl Environ Microbiol. 2016 Feb 5;82(7):2227-2237. doi: 10.1128/AEM.03482-15. Appl Environ Microbiol. 2016. PMID: 26850298 Free PMC article.

8

Functional soil metagenomics: elucidation of polycyclic aromatic hydrocarbon degradation potential following 12 years of in situ bioremediation.

Duarte M, Nielsen A, Camarinha-Silva A, Vilchez-Vargas R, Bruls T, Wos-Oxley ML, Jauregui R, Pieper DH. Duarte M, et al. Environ Microbiol. 2017 Aug;19(8):2992-3011. doi: 10.1111/1462-2920.13756. Epub 2017 May 11. Environ Microbiol. 2017. PMID: 28401633 Free article.

9

Microbial Toluene Removal in Hypoxic Model Constructed Wetlands Occurs Predominantly via the Ring Monooxygenation Pathway.

Martínez-Lavanchy PM, Chen Z, Lünsmann V, Marin-Cevada V, Vilchez-Vargas R, Pieper DH, Reiche N, Kappelmeyer U, Imparato V, Junca H, Nijenhuis I, Müller JA, Kuschk P, Heipieper HJ. Martínez-Lavanchy PM, et al. Appl Environ Microbiol. 2015 Sep;81(18):6241-52. doi: 10.1128/AEM.01822-15. Epub 2015 Jul 6. Appl Environ Microbiol. 2015. PMID: 26150458 Free PMC article.

10

Draft Genome Sequence of the Naphthalene Degrader Herbaspirillum sp. Strain RV1423.

Jauregui R, Rodelas B, Geffers R, Boon N, Pieper DH, Vilchez-Vargas R. Jauregui R, et al. Genome Announc. 2014 Mar 20;2(2):e00188-14. doi: 10.1128/genomeA.00188-14. Genome Announc. 2014. PMID: 24652979 Free PMC article.

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