Byrnes J - Search Results

1

Base Flipping by MTERF1 Can Accommodate Multiple Conformations and Occurs in a Stepwise Fashion.

Byrnes J, Hauser K, Norona L, Mejia E, Simmerling C, Garcia-Diaz M. Byrnes J, et al. J Mol Biol. 2016 Jun 19;428(12):2542-2556. doi: 10.1016/j.jmb.2015.10.021. Epub 2015 Oct 30. J Mol Biol. 2016. PMID: 26523681 Free PMC article.

2

Helix unwinding and base flipping enable human MTERF1 to terminate mitochondrial transcription.

Yakubovskaya E, Mejia E, Byrnes J, Hambardjieva E, Garcia-Diaz M. Yakubovskaya E, et al. Among authors: byrnes j. Cell. 2010 Jun 11;141(6):982-93. doi: 10.1016/j.cell.2010.05.018. Cell. 2010. PMID: 20550934 Free PMC article.

3

Mitochondrial transcription: how does it end?

Byrnes J, Garcia-Diaz M. Byrnes J, et al. Transcription. 2011 Jan-Feb;2(1):32-6. doi: 10.4161/trns.2.1.14006. Transcription. 2011. PMID: 21326908 Free PMC article.

4

Comparative genomic hybridization by representational oligonucleotide microarray analysis.

Lucito R, Byrnes J. Lucito R, et al. Among authors: byrnes j. Methods Mol Biol. 2009;556:33-46. doi: 10.1007/978-1-60327-192-9_4. Methods Mol Biol. 2009. PMID: 19488870

5

Identification of tumor suppressors and oncogenes from genomic and epigenetic features in ovarian cancer.

Wrzeszczynski KO, Varadan V, Byrnes J, Lum E, Kamalakaran S, Levine DA, Dimitrova N, Zhang MQ, Lucito R. Wrzeszczynski KO, et al. Among authors: byrnes j. PLoS One. 2011;6(12):e28503. doi: 10.1371/journal.pone.0028503. Epub 2011 Dec 8. PLoS One. 2011. PMID: 22174824 Free PMC article.

6

Heterotropic roles of divalent cations in the establishment of allostery and affinity maturation of integrin αXβ2.

Manandhar P, Mazhar Z, Abousaway O, Aboagye C, Moussa Z, Lim D, Yu T, Byrnes J, Briggs JM, Sen M. Manandhar P, et al. Among authors: byrnes j. Cell Rep. 2022 Aug 23;40(8):111254. doi: 10.1016/j.celrep.2022.111254. Cell Rep. 2022. PMID: 36001965 Free PMC article.

7

Molecular recognition of a host protein by NS1 of pandemic and seasonal influenza A viruses.

Cho JH, Zhao B, Shi J, Savage N, Shen Q, Byrnes J, Yang L, Hwang W, Li P. Cho JH, et al. Among authors: byrnes j. Proc Natl Acad Sci U S A. 2020 Mar 24;117(12):6550-6558. doi: 10.1073/pnas.1920582117. Epub 2020 Mar 9. Proc Natl Acad Sci U S A. 2020. PMID: 32152123 Free PMC article.

8

Structural Characterization of Nucleic Acid Nanoparticles Using SAXS and SAXS-Driven MD.

Byrnes J, Chopra K, Rolband LA, Danai L, Chodankar S, Yang L, Afonin KA. Byrnes J, et al. Methods Mol Biol. 2023;2709:65-94. doi: 10.1007/978-1-0716-3417-2_4. Methods Mol Biol. 2023. PMID: 37572273 Free PMC article.

9

Solution scattering at the Life Science X-ray Scattering (LiX) beamline.

Yang L, Antonelli S, Chodankar S, Byrnes J, Lazo E, Qian K. Yang L, et al. Among authors: byrnes j. J Synchrotron Radiat. 2020 May 1;27(Pt 3):804-812. doi: 10.1107/S1600577520002362. Epub 2020 Mar 31. J Synchrotron Radiat. 2020. PMID: 32381785 Free PMC article.

10

DNA origami protection and molecular interfacing through engineered sequence-defined peptoids.

Wang ST, Gray MA, Xuan S, Lin Y, Byrnes J, Nguyen AI, Todorova N, Stevens MM, Bertozzi CR, Zuckermann RN, Gang O. Wang ST, et al. Among authors: byrnes j. Proc Natl Acad Sci U S A. 2020 Mar 24;117(12):6339-6348. doi: 10.1073/pnas.1919749117. Epub 2020 Mar 12. Proc Natl Acad Sci U S A. 2020. PMID: 32165539 Free PMC article.

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