Xu Z - Search Results

1

A hidden Markov random field-based Bayesian method for the detection of long-range chromosomal interactions in Hi-C data.

Xu Z, Zhang G, Jin F, Chen M, Furey TS, Sullivan PF, Qin Z, Hu M, Li Y. Xu Z, et al. Bioinformatics. 2016 Mar 1;32(5):650-6. doi: 10.1093/bioinformatics/btv650. Epub 2015 Nov 4. Bioinformatics. 2016. PMID: 26543175 Free PMC article.

2

AbCD: arbitrary coverage design for sequencing-based genetic studies.

Kang J, Huang KC, Xu Z, Wang Y, Abecasis GR, Li Y. Kang J, et al. Among authors: xu z. Bioinformatics. 2013 Mar 15;29(6):799-801. doi: 10.1093/bioinformatics/btt041. Epub 2013 Jan 28. Bioinformatics. 2013. PMID: 23357921 Free PMC article.

3

DISSCO: direct imputation of summary statistics allowing covariates.

Xu Z, Duan Q, Yan S, Chen W, Li M, Lange E, Li Y. Xu Z, et al. Bioinformatics. 2015 Aug 1;31(15):2434-42. doi: 10.1093/bioinformatics/btv168. Epub 2015 Mar 24. Bioinformatics. 2015. PMID: 25810429 Free PMC article.

4

Likelihood-based complex trait association testing for arbitrary depth sequencing data.

Yan S, Yuan S, Xu Z, Zhang B, Zhang B, Kang G, Byrnes A, Li Y. Yan S, et al. Among authors: xu z. Bioinformatics. 2015 Sep 15;31(18):2955-62. doi: 10.1093/bioinformatics/btv307. Epub 2015 May 14. Bioinformatics. 2015. PMID: 25979475 Free PMC article.

5

HiView: an integrative genome browser to leverage Hi-C results for the interpretation of GWAS variants.

Xu Z, Zhang G, Duan Q, Chai S, Zhang B, Wu C, Jin F, Yue F, Li Y, Hu M. Xu Z, et al. BMC Res Notes. 2016 Mar 11;9:159. doi: 10.1186/s13104-016-1947-0. BMC Res Notes. 2016. PMID: 26969411 Free PMC article.

6

Across-Platform Imputation of DNA Methylation Levels Incorporating Nonlocal Information Using Penalized Functional Regression.

Zhang G, Huang KC, Xu Z, Tzeng JY, Conneely KN, Guan W, Kang J, Li Y. Zhang G, et al. Among authors: xu z. Genet Epidemiol. 2016 May;40(4):333-40. doi: 10.1002/gepi.21969. Epub 2016 Apr 7. Genet Epidemiol. 2016. PMID: 27061717 Free PMC article.

7

FastHiC: a fast and accurate algorithm to detect long-range chromosomal interactions from Hi-C data.

Xu Z, Zhang G, Wu C, Li Y, Hu M. Xu Z, et al. Bioinformatics. 2016 Sep 1;32(17):2692-5. doi: 10.1093/bioinformatics/btw240. Epub 2016 May 3. Bioinformatics. 2016. PMID: 27153668 Free PMC article.

8

A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome.

Schmitt AD, Hu M, Jung I, Xu Z, Qiu Y, Tan CL, Li Y, Lin S, Lin Y, Barr CL, Ren B. Schmitt AD, et al. Among authors: xu z. Cell Rep. 2016 Nov 15;17(8):2042-2059. doi: 10.1016/j.celrep.2016.10.061. Cell Rep. 2016. PMID: 27851967 Free PMC article.

9

HUGIn: Hi-C Unifying Genomic Interrogator.

Martin JS, Xu Z, Reiner AP, Mohlke KL, Sullivan P, Ren B, Hu M, Li Y. Martin JS, et al. Among authors: xu z. Bioinformatics. 2017 Dec 1;33(23):3793-3795. doi: 10.1093/bioinformatics/btx359. Bioinformatics. 2017. PMID: 28582503 Free PMC article.

10

Trans-ancestry Fine Mapping and Molecular Assays Identify Regulatory Variants at the ANGPTL8 HDL-C GWAS Locus.

Cannon ME, Duan Q, Wu Y, Zeynalzadeh M, Xu Z, Kangas AJ, Soininen P, Ala-Korpela M, Civelek M, Lusis AJ, Kuusisto J, Collins FS, Boehnke M, Tang H, Laakso M, Li Y, Mohlke KL. Cannon ME, et al. Among authors: xu z. G3 (Bethesda). 2017 Sep 7;7(9):3217-3227. doi: 10.1534/g3.117.300088. G3 (Bethesda). 2017. PMID: 28754724 Free PMC article.

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