Carlson JE - Search Results

1

Preliminary Genomic Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing.

Staton M, Best T, Khodwekar S, Owusu S, Xu T, Xu Y, Jennings T, Cronn R, Arumuganathan AK, Coggeshall M, Gailing O, Liang H, Romero-Severson J, Schlarbaum S, Carlson JE. Staton M, et al. Among authors: carlson je. PLoS One. 2015 Dec 23;10(12):e0145031. doi: 10.1371/journal.pone.0145031. eCollection 2015. PLoS One. 2015. PMID: 26698853 Free PMC article.

2

Development of novel genic microsatellite markers from transcriptome sequencing in sugar maple (Acer saccharum Marsh.).

Harmon M, Lane T, Staton M, Coggeshall MV, Best T, Chen CC, Liang H, Zembower N, Drautz-Moses DI, Hwee YZ, Schuster SC, Schlarbaum SE, Carlson JE, Gailing O. Harmon M, et al. Among authors: carlson je. BMC Res Notes. 2017 Aug 8;10(1):369. doi: 10.1186/s13104-017-2653-2. BMC Res Notes. 2017. PMID: 28789702 Free PMC article.

3

Comparison of gene order of GIGANTEA loci in yellow-poplar, monocots, and eudicots.

Liang H, Barakat A, Schlarbaum SE, Mandoli DF, Carlson JE. Liang H, et al. Among authors: carlson je. Genome. 2010 Jul;53(7):533-44. doi: 10.1139/g10-031. Genome. 2010. PMID: 20616875

4

Development of genomic microsatellites in Gleditsia triacanthos (Fabaceae) using Illumina sequencing.

Owusu SA, Staton M, Jennings TN, Schlarbaum S, Coggeshall MV, Romero-Severson J, Carlson JE, Gailing O. Owusu SA, et al. Among authors: carlson je. Appl Plant Sci. 2013 Nov 28;1(12):apps.1300050. doi: 10.3732/apps.1300050. eCollection 2013 Dec. Appl Plant Sci. 2013. PMID: 25202504 Free PMC article.

5

The green ash transcriptome and identification of genes responding to abiotic and biotic stresses.

Lane T, Best T, Zembower N, Davitt J, Henry N, Xu Y, Koch J, Liang H, McGraw J, Schuster S, Shim D, Coggeshall MV, Carlson JE, Staton ME. Lane T, et al. Among authors: carlson je. BMC Genomics. 2016 Sep 2;17(1):702. doi: 10.1186/s12864-016-3052-0. BMC Genomics. 2016. PMID: 27589953 Free PMC article.

6

High-quality genetic mapping with ddRADseq in the non-model tree Quercus rubra.

Konar A, Choudhury O, Bullis R, Fiedler L, Kruser JM, Stephens MT, Gailing O, Schlarbaum S, Coggeshall MV, Staton ME, Carlson JE, Emrich S, Romero-Severson J. Konar A, et al. Among authors: carlson je. BMC Genomics. 2017 May 30;18(1):417. doi: 10.1186/s12864-017-3765-8. BMC Genomics. 2017. PMID: 28558688 Free PMC article.

7

The first genetic linkage map for Fraxinus pennsylvanica and syntenic relationships with four related species.

Wu D, Koch J, Coggeshall M, Carlson J. Wu D, et al. Plant Mol Biol. 2019 Feb;99(3):251-264. doi: 10.1007/s11103-018-0815-9. Epub 2019 Jan 2. Plant Mol Biol. 2019. PMID: 30604323

8

Substantial genome synteny preservation among woody angiosperm species: comparative genomics of Chinese chestnut (Castanea mollissima) and plant reference genomes.

Staton M, Zhebentyayeva T, Olukolu B, Fang GC, Nelson D, Carlson JE, Abbott AG. Staton M, et al. Among authors: carlson je. BMC Genomics. 2015 Oct 5;16:744. doi: 10.1186/s12864-015-1942-1. BMC Genomics. 2015. PMID: 26438416 Free PMC article.

9

A high-quality reference genome for Fraxinus pennsylvanica for ash species restoration and research.

Huff M, Seaman J, Wu D, Zhebentyayeva T, Kelly LJ, Faridi N, Nelson CD, Cooper E, Best T, Steiner K, Koch J, Romero Severson J, Carlson JE, Buggs R, Staton M. Huff M, et al. Among authors: carlson je. Mol Ecol Resour. 2022 May;22(4):1284-1302. doi: 10.1111/1755-0998.13545. Epub 2021 Nov 27. Mol Ecol Resour. 2022. PMID: 34748273 Free PMC article.

10

Transcriptome profiles of Quercus rubra responding to increased O₃ stress.

Soltani N, Best T, Grace D, Nelms C, Shumaker K, Romero-Severson J, Moses D, Schuster S, Staton M, Carlson J, Gwinn K. Soltani N, et al. BMC Genomics. 2020 Feb 14;21(1):160. doi: 10.1186/s12864-020-6549-5. BMC Genomics. 2020. PMID: 32059640 Free PMC article.

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