Whitacre LK - Search Results

1

What's in your next-generation sequence data? An exploration of unmapped DNA and RNA sequence reads from the bovine reference individual.

Whitacre LK, Tizioto PC, Kim J, Sonstegard TS, Schroeder SG, Alexander LJ, Medrano JF, Schnabel RD, Taylor JF, Decker JE. Whitacre LK, et al. BMC Genomics. 2015 Dec 29;16:1114. doi: 10.1186/s12864-015-2313-7. BMC Genomics. 2015. PMID: 26714747 Free PMC article.

2

Lessons for livestock genomics from genome and transcriptome sequencing in cattle and other mammals.

Taylor JF, Whitacre LK, Hoff JL, Tizioto PC, Kim J, Decker JE, Schnabel RD. Taylor JF, et al. Among authors: whitacre lk. Genet Sel Evol. 2016 Aug 17;48(1):59. doi: 10.1186/s12711-016-0237-6. Genet Sel Evol. 2016. PMID: 27534529 Free PMC article.

3

Elucidating the genetic basis of an oligogenic birth defect using whole genome sequence data in a non-model organism, Bubalus bubalis.

Whitacre LK, Hoff JL, Schnabel RD, Albarella S, Ciotola F, Peretti V, Strozzi F, Ferrandi C, Ramunno L, Sonstegard TS, Williams JL, Taylor JF, Decker JE. Whitacre LK, et al. Sci Rep. 2017 Jan 3;7:39719. doi: 10.1038/srep39719. Sci Rep. 2017. PMID: 28045068 Free PMC article.

4

Identification of bovine CpG SNPs as potential targets for epigenetic regulation via DNA methylation.

Maldonado MBC, de Rezende Neto NB, Nagamatsu ST, Carazzolle MF, Hoff JL, Whitacre LK, Schnabel RD, Behura SK, McKay SD, Taylor JF, Lopes FL. Maldonado MBC, et al. Among authors: whitacre lk. PLoS One. 2019 Sep 12;14(9):e0222329. doi: 10.1371/journal.pone.0222329. eCollection 2019. PLoS One. 2019. PMID: 31513639 Free PMC article.

5

Exploring genetic variation and population structure in a threatened species, Noturus placidus, with whole-genome sequence data.

Whitacre LK, Wildhaber ML, Johnson GS, Durbin HJ, Rowan TN, Tribe P, Schnabel RD, Mhlanga-Mutangadura T, Tabor VM, Fenner D, Decker JE. Whitacre LK, et al. G3 (Bethesda). 2022 Apr 4;12(4):jkac046. doi: 10.1093/g3journal/jkac046. G3 (Bethesda). 2022. PMID: 35188205 Free PMC article.

6

Genetic diversity and population structure of South African smallholder farmer sheep breeds determined using the OvineSNP50 beadchip.

Molotsi AH, Taylor JF, Cloete SWP, Muchadeyi F, Decker JE, Whitacre LK, Sandenbergh L, Dzama K. Molotsi AH, et al. Among authors: whitacre lk. Trop Anim Health Prod. 2017 Dec;49(8):1771-1777. doi: 10.1007/s11250-017-1392-7. Epub 2017 Sep 16. Trop Anim Health Prod. 2017. PMID: 28916880

7

A postbiotic from Aspergillus oryzae attenuates the impact of heat stress in ectothermic and endothermic organisms.

Kaufman JD, Seidler Y, Bailey HR, Whitacre L, Bargo F, Lüersen K, Rimbach G, Pighetti GM, Ipharraguerre IR, Ríus AG. Kaufman JD, et al. Sci Rep. 2021 Mar 19;11(1):6407. doi: 10.1038/s41598-021-85707-3. Sci Rep. 2021. PMID: 33742039 Free PMC article.

8

Insight into the genetic composition of South African Sanga cattle using SNP data from cattle breeds worldwide.

Makina SO, Whitacre LK, Decker JE, Taylor JF, MacNeil MD, Scholtz MM, van Marle-Köster E, Muchadeyi FC, Makgahlela ML, Maiwashe A. Makina SO, et al. Among authors: whitacre lk. Genet Sel Evol. 2016 Nov 15;48(1):88. doi: 10.1186/s12711-016-0266-1. Genet Sel Evol. 2016. PMID: 27846793 Free PMC article.

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