Hogan DA - Search Results

1

COMPUTATIONAL APPROACHES TO STUDY MICROBES AND MICROBIOMES.

Greene CS, Foster JA, Stanton BA, Hogan DA, Bromberg Y. Greene CS, et al. Among authors: hogan da. Pac Symp Biocomput. 2016;21:557-67. Pac Symp Biocomput. 2016. PMID: 26776218 Free PMC article.

2

The Pseudomonas aeruginosa secreted protein PA2934 decreases apical membrane expression of the cystic fibrosis transmembrane conductance regulator.

MacEachran DP, Ye S, Bomberger JM, Hogan DA, Swiatecka-Urban A, Stanton BA, O'Toole GA. MacEachran DP, et al. Among authors: hogan da. Infect Immun. 2007 Aug;75(8):3902-12. doi: 10.1128/IAI.00338-07. Epub 2007 May 14. Infect Immun. 2007. PMID: 17502391 Free PMC article.

3

Anr and its activation by PlcH activity in Pseudomonas aeruginosa host colonization and virulence.

Jackson AA, Gross MJ, Daniels EF, Hampton TH, Hammond JH, Vallet-Gely I, Dove SL, Stanton BA, Hogan DA. Jackson AA, et al. Among authors: hogan da. J Bacteriol. 2013 Jul;195(13):3093-104. doi: 10.1128/JB.02169-12. Epub 2013 May 10. J Bacteriol. 2013. PMID: 23667230 Free PMC article.

4

Pseudomonas aeruginosa Reduces VX-809 Stimulated F508del-CFTR Chloride Secretion by Airway Epithelial Cells.

Stanton BA, Coutermarsh B, Barnaby R, Hogan D. Stanton BA, et al. PLoS One. 2015 May 27;10(5):e0127742. doi: 10.1371/journal.pone.0127742. eCollection 2015. PLoS One. 2015. PMID: 26018799 Free PMC article.

5

Analysis of Lung Microbiota in Bronchoalveolar Lavage, Protected Brush and Sputum Samples from Subjects with Mild-To-Moderate Cystic Fibrosis Lung Disease.

Hogan DA, Willger SD, Dolben EL, Hampton TH, Stanton BA, Morrison HG, Sogin ML, Czum J, Ashare A. Hogan DA, et al. PLoS One. 2016 Mar 4;11(3):e0149998. doi: 10.1371/journal.pone.0149998. eCollection 2016. PLoS One. 2016. PMID: 26943329 Free PMC article.

6

A Novel Mechanism of Host-Pathogen Interaction through sRNA in Bacterial Outer Membrane Vesicles.

Koeppen K, Hampton TH, Jarek M, Scharfe M, Gerber SA, Mielcarz DW, Demers EG, Dolben EL, Hammond JH, Hogan DA, Stanton BA. Koeppen K, et al. Among authors: hogan da. PLoS Pathog. 2016 Jun 13;12(6):e1005672. doi: 10.1371/journal.ppat.1005672. eCollection 2016 Jun. PLoS Pathog. 2016. PMID: 27295279 Free PMC article.

7

ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa Gene Expression Data with Denoising Autoencoders Illuminates Microbe-Host Interactions.

Tan J, Hammond JH, Hogan DA, Greene CS. Tan J, et al. Among authors: hogan da. mSystems. 2016 Jan 19;1(1):e00025-15. doi: 10.1128/mSystems.00025-15. eCollection 2016 Jan-Feb. mSystems. 2016. PMID: 27822512 Free PMC article.

8

Unsupervised Extraction of Stable Expression Signatures from Public Compendia with an Ensemble of Neural Networks.

Tan J, Doing G, Lewis KA, Price CE, Chen KM, Cady KC, Perchuk B, Laub MT, Hogan DA, Greene CS. Tan J, et al. Among authors: hogan da. Cell Syst. 2017 Jul 26;5(1):63-71.e6. doi: 10.1016/j.cels.2017.06.003. Epub 2017 Jul 12. Cell Syst. 2017. PMID: 28711280 Free PMC article.

9

An epoxide hydrolase secreted by Pseudomonas aeruginosa decreases mucociliary transport and hinders bacterial clearance from the lung.

Hvorecny KL, Dolben E, Moreau-Marquis S, Hampton TH, Shabaneh TB, Flitter BA, Bahl CD, Bomberger JM, Levy BD, Stanton BA, Hogan DA, Madden DR. Hvorecny KL, et al. Among authors: hogan da. Am J Physiol Lung Cell Mol Physiol. 2018 Jan 1;314(1):L150-L156. doi: 10.1152/ajplung.00383.2017. Epub 2017 Oct 5. Am J Physiol Lung Cell Mol Physiol. 2018. PMID: 28982736 Free PMC article.

10

ADAGE signature analysis: differential expression analysis with data-defined gene sets.

Tan J, Huyck M, Hu D, Zelaya RA, Hogan DA, Greene CS. Tan J, et al. Among authors: hogan da. BMC Bioinformatics. 2017 Nov 22;18(1):512. doi: 10.1186/s12859-017-1905-4. BMC Bioinformatics. 2017. PMID: 29166858 Free PMC article.

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