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Integrated Genomic and Social Network Analyses of SARS-CoV-2 Transmission in the Healthcare Setting.
Keehner J, Abeles SR, Longhurst CA, Horton LE, Myers FE, Riggs-Rodriguez L, Ahmad M, Baxter S, Boussina A, Cantrell K, Cardenas P, De Hoff P, El-Kareh R, Holland J, Ikeda D, Kurashige K, Laurent LC; SEARCH Alliance; Lucas A, Pride D, Sathe S, Tran AR, Vasylyeva TI, Yeo G, Knight R, Wertheim JO, Torriani FJ. Keehner J, et al. Clin Infect Dis. 2024 May 15;78(5):1204-1213. doi: 10.1093/cid/ciad738. Clin Infect Dis. 2024. PMID: 38227643
A simple solid media assay for detection of synergy between bacteriophages and antibiotics.
Khong E, Oh J, Jimenez JM, Liu R, Dunham S, Monsibais A, Rhoads A, Ghatbale P, Garcia A, Cobián Güemes AG, Blanc AN, Chiu M, Kuo P, Proost M, Kline A, Aslam S, Schooley RT, Whiteson K, Fraley SI, Pride DT. Khong E, et al. Among authors: pride dt. bioRxiv [Preprint]. 2023 Aug 24:2023.08.23.554535. doi: 10.1101/2023.08.23.554535. bioRxiv. 2023. Update in: Microbiol Spectr. 2024 May 2;12(5):e0322123. doi: 10.1128/spectrum.03221-23 PMID: 37662290 Free PMC article. Updated. Preprint.
Pangenome comparison of Bacteroides fragilis genomospecies unveil genetic diversity and ecological insights.
Oles RE, Terrazas MC, Loomis LR, Hsu CY, Tribelhorn C, Ferre PB, Ea A, Bryant M, Young J, Carrow HC, Sandborn WJ, Dulai P, Sivagnanam M, Pride D, Knight R, Chu H. Oles RE, et al. bioRxiv [Preprint]. 2023 Dec 21:2023.12.20.572674. doi: 10.1101/2023.12.20.572674. bioRxiv. 2023. Update in: mSystems. 2024 Jul 23;9(7):e0051624. doi: 10.1128/msystems.00516-24 PMID: 38187556 Free PMC article. Updated. Preprint.
Transmission of viruses via our microbiomes.
Ly M, Jones MB, Abeles SR, Santiago-Rodriguez TM, Gao J, Chan IC, Ghose C, Pride DT. Ly M, et al. Among authors: pride dt. Microbiome. 2016 Dec 2;4(1):64. doi: 10.1186/s40168-016-0212-z. Microbiome. 2016. PMID: 27912785 Free PMC article.
Fecal virome transplantation is sufficient to alter fecal microbiota and drive lean and obese body phenotypes in mice.
Borin JM, Liu R, Wang Y, Wu TC, Chopyk J, Huang L, Kuo P, Ghose C, Meyer JR, Tu XM, Schnabl B, Pride DT. Borin JM, et al. Among authors: pride dt. bioRxiv [Preprint]. 2023 Feb 4:2023.02.03.527064. doi: 10.1101/2023.02.03.527064. bioRxiv. 2023. Update in: Gut Microbes. 2023 Jan-Dec;15(1):2236750. doi: 10.1080/19490976.2023.2236750 PMID: 36778328 Free PMC article. Updated. Preprint.
78 results