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Page 1
The role of structural parameters in DNA cyclization.
Alexandrov LB, Bishop AR, Rasmussen KØ, Alexandrov BS. Alexandrov LB, et al. Among authors: bishop ar. BMC Bioinformatics. 2016 Feb 4;17:68. doi: 10.1186/s12859-016-0897-9. BMC Bioinformatics. 2016. PMID: 26846597 Free PMC article.
A nonlinear dynamic model of DNA with a sequence-dependent stacking term.
Alexandrov BS, Gelev V, Monisova Y, Alexandrov LB, Bishop AR, Rasmussen KØ, Usheva A. Alexandrov BS, et al. Among authors: bishop ar. Nucleic Acids Res. 2009 Apr;37(7):2405-10. doi: 10.1093/nar/gkp016. Epub 2009 Mar 5. Nucleic Acids Res. 2009. PMID: 19264801 Free PMC article.
Opening rates of DNA hairpins: experiment and model.
Hanne J, Zocchi G, Voulgarakis NK, Bishop AR, Rasmussen KØ. Hanne J, et al. Among authors: bishop ar. Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Jul;76(1 Pt 1):011909. doi: 10.1103/PhysRevE.76.011909. Epub 2007 Jul 16. Phys Rev E Stat Nonlin Soft Matter Phys. 2007. PMID: 17677496
Nonlinearity in DNA and its relation to specific functions.
Alexandrov B, Rasmussen KØ, Bishop AR. Alexandrov B, et al. Among authors: bishop ar. J Biol Phys. 2009 Feb;35(1):31-41. doi: 10.1007/s10867-009-9125-4. Epub 2009 Feb 25. J Biol Phys. 2009. PMID: 19669567 Free PMC article.
Pre-melting dynamics of DNA and its relation to specific functions.
Alexandrov B, Voulgarakis NK, Rasmussen KO, Usheva A, Bishop AR. Alexandrov B, et al. Among authors: bishop ar. J Phys Condens Matter. 2009 Jan 21;21(3):034107. doi: 10.1088/0953-8984/21/3/034107. Epub 2008 Dec 17. J Phys Condens Matter. 2009. PMID: 21817252
Binding of nucleoid-associated protein fis to DNA is regulated by DNA breathing dynamics.
Nowak-Lovato K, Alexandrov LB, Banisadr A, Bauer AL, Bishop AR, Usheva A, Mu F, Hong-Geller E, Rasmussen KØ, Hlavacek WS, Alexandrov BS. Nowak-Lovato K, et al. Among authors: bishop ar. PLoS Comput Biol. 2013;9(1):e1002881. doi: 10.1371/journal.pcbi.1002881. Epub 2013 Jan 17. PLoS Comput Biol. 2013. PMID: 23341768 Free PMC article.
283 results