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Distinguishing highly similar gene isoforms with a clustering-based bioinformatics analysis of PacBio single-molecule long reads.
Liang M, Raley C, Zheng X, Kutty G, Gogineni E, Sherman BT, Sun Q, Chen X, Skelly T, Jones K, Stephens R, Zhou B, Lau W, Johnson C, Imamichi T, Jiang M, Dewar R, Lempicki RA, Tran B, Kovacs JA, Huang DW. Liang M, et al. Among authors: sherman bt. BioData Min. 2016 Apr 5;9:13. doi: 10.1186/s13040-016-0090-8. eCollection 2016. BioData Min. 2016. PMID: 27051465 Free PMC article.
Identifying biological themes within lists of genes with EASE.
Hosack DA, Dennis G Jr, Sherman BT, Lane HC, Lempicki RA. Hosack DA, et al. Among authors: sherman bt. Genome Biol. 2003;4(10):R70. doi: 10.1186/gb-2003-4-10-r70. Epub 2003 Sep 11. Genome Biol. 2003. PMID: 14519205 Free PMC article.
DAVID gene ID conversion tool.
Huang da W, Sherman BT, Stephens R, Baseler MW, Lane HC, Lempicki RA. Huang da W, et al. Among authors: sherman bt. Bioinformation. 2008 Jul 30;2(10):428-30. doi: 10.6026/97320630002428. Bioinformation. 2008. PMID: 18841237 Free PMC article.
Extracting biological meaning from large gene lists with DAVID.
Huang da W, Sherman BT, Zheng X, Yang J, Imamichi T, Stephens R, Lempicki RA. Huang da W, et al. Among authors: sherman bt. Curr Protoc Bioinformatics. 2009 Sep;Chapter 13:Unit 13.11. doi: 10.1002/0471250953.bi1311s27. Curr Protoc Bioinformatics. 2009. PMID: 19728287
53 results