Kachhap S - Search Results

1

Molecular dynamics simulations show altered secondary structure of clawless in binary complex with DNA providing insights into aristaless-clawless-DNA ternary complex formation.

Kachhap S, Priyadarshini P, Singh B. Kachhap S, et al. J Biomol Struct Dyn. 2017 May;35(6):1153-1167. doi: 10.1080/07391102.2016.1175967. Epub 2016 May 4. J Biomol Struct Dyn. 2017. PMID: 27058822

2

The length of glycine-rich linker in DNA-binding domain is critical for optimal functioning of quorum-sensing master regulatory protein HapR.

Singh NS, Kachhap S, Singh R, Mishra RC, Singh B, Raychaudhuri S. Singh NS, et al. Among authors: kachhap s. Mol Genet Genomics. 2014 Dec;289(6):1171-82. doi: 10.1007/s00438-014-0878-5. Epub 2014 Jul 5. Mol Genet Genomics. 2014. PMID: 24997084

3

Role of DNA conformation & energetic insights in Msx-1-DNA recognition as revealed by molecular dynamics studies on specific and nonspecific complexes.

Kachhap S, Singh B. Kachhap S, et al. J Biomol Struct Dyn. 2015;33(10):2069-82. doi: 10.1080/07391102.2014.995709. Epub 2015 Jan 12. J Biomol Struct Dyn. 2015. PMID: 25484111

4

Eukaryotic-type serine/threonine kinase mediated phosphorylation at Thr¹⁶⁹ perturbs mycobacterial guanylate kinase activity.

S Yadav G, K Ravala S, Kachhap S, Thakur M, Roy A, Singh B, Karthikeyan S, K Chakraborti P. S Yadav G, et al. Among authors: kachhap s. Biosci Rep. 2017 Nov 15;37(6):BSR20171048. doi: 10.1042/BSR20171048. Print 2017 Dec 22. Biosci Rep. 2017. PMID: 28963370 Free PMC article.

5

Convergence of two global regulators to coordinate expression of essential virulence determinants of Mycobacterium tuberculosis.

Khan H, Paul P, Sevalkar RR, Kachhap S, Singh B, Sarkar D. Khan H, et al. Among authors: kachhap s. Elife. 2022 Nov 9;11:e80965. doi: 10.7554/eLife.80965. Elife. 2022. PMID: 36350294 Free PMC article.

6

An Escherichia coli strain, PGB01, isolated from feral pigeon Faeces, thermally fit to survive in pigeon, shows high level resistance to trimethoprim.

Kumar A, Tiwary BK, Kachhap S, Nanda AK, Chakraborty R. Kumar A, et al. Among authors: kachhap s. PLoS One. 2015 Mar 9;10(3):e0119329. doi: 10.1371/journal.pone.0119329. eCollection 2015. PLoS One. 2015. PMID: 25750990 Free PMC article.

7

Computational insights on molecular interactions of acifran with GPR109A and GPR109B.

Adepu KK, Kachhap S, Bhandari D, Anishkin A, Chintapalli SV. Adepu KK, et al. Among authors: kachhap s. J Mol Model. 2022 Jul 28;28(8):237. doi: 10.1007/s00894-022-05233-5. J Mol Model. 2022. PMID: 35900600

8

Structural and Energetic Insights Into the Interaction of Niacin With the GPR109A Receptor.

Adepu KK, Kachhap S, Anishkin A, Chintapalli SV. Adepu KK, et al. Among authors: kachhap s. Bioinform Biol Insights. 2021 Nov 27;15:11779322211056122. doi: 10.1177/11779322211056122. eCollection 2021. Bioinform Biol Insights. 2021. PMID: 34866904 Free PMC article.

9

Model Setup and Procedures for Prediction of Enzyme Reaction Kinetics with QM-Only and QM:MM Approaches.

Glanowski M, Kachhap S, Borowski T, Szaleniec M. Glanowski M, et al. Among authors: kachhap s. Methods Mol Biol. 2022;2385:175-236. doi: 10.1007/978-1-0716-1767-0_10. Methods Mol Biol. 2022. PMID: 34888722

10

Allosteric cooperation in β-lactam binding to a non-classical transpeptidase.

Ahmad N, Dugad S, Chauhan V, Ahmed S, Sharma K, Kachhap S, Zaidi R, Bishai WR, Lamichhane G, Kumar P. Ahmad N, et al. Among authors: kachhap s. Elife. 2022 Apr 27;11:e73055. doi: 10.7554/eLife.73055. Elife. 2022. PMID: 35475970 Free PMC article.

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