Ramsak Z - Search Results

1

System level analysis of cacao seed ripening reveals a sequential interplay of primary and secondary metabolism leading to polyphenol accumulation and preparation of stress resistance.

Wang L, Nägele T, Doerfler H, Fragner L, Chaturvedi P, Nukarinen E, Bellaire A, Huber W, Weiszmann J, Engelmeier D, Ramsak Z, Gruden K, Weckwerth W. Wang L, et al. Among authors: ramsak z. Plant J. 2016 Aug;87(3):318-32. doi: 10.1111/tpj.13201. Epub 2016 Aug 5. Plant J. 2016. PMID: 27136060 Free article.

2

GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology.

Ramsak Ž, Baebler Š, Rotter A, Korbar M, Mozetic I, Usadel B, Gruden K. Ramsak Ž, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D1167-75. doi: 10.1093/nar/gkt1056. Epub 2013 Nov 4. Nucleic Acids Res. 2014. PMID: 24194592 Free PMC article.

3

Optimising droplet digital PCR analysis approaches for detection and quantification of bacteria: a case study of fire blight and potato brown rot.

Dreo T, Pirc M, Ramšak Ž, Pavšič J, Milavec M, Zel J, Gruden K. Dreo T, et al. Among authors: ramsak z. Anal Bioanal Chem. 2014 Oct;406(26):6513-28. doi: 10.1007/s00216-014-8084-1. Epub 2014 Aug 31. Anal Bioanal Chem. 2014. PMID: 25173868

4

Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction.

Stare T, Ramšak Ž, Blejec A, Stare K, Turnšek N, Weckwerth W, Wienkoop S, Vodnik D, Gruden K. Stare T, et al. Among authors: ramsak z. BMC Genomics. 2015 Sep 19;16(1):716. doi: 10.1186/s12864-015-1925-2. BMC Genomics. 2015. PMID: 26386579 Free PMC article.

5

Heterogeneous glioblastoma cell cross-talk promotes phenotype alterations and enhanced drug resistance.

Motaln H, Koren A, Gruden K, Ramšak Ž, Schichor C, Lah TT. Motaln H, et al. Among authors: ramsak z. Oncotarget. 2015 Dec 1;6(38):40998-1017. doi: 10.18632/oncotarget.5701. Oncotarget. 2015. PMID: 26517510 Free PMC article.

6

Erratum to: Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction.

Stare T, Ramšak Ž, Blejec A, Stare K, Turnšek N, Weckwerth W, Wienkoop S, Vodnik D, Gruden K. Stare T, et al. Among authors: ramsak z. BMC Genomics. 2017 Mar 13;18(1):226. doi: 10.1186/s12864-017-3611-z. BMC Genomics. 2017. PMID: 28288559 Free PMC article. No abstract available.

7

Salicylic Acid Perturbs sRNA-Gibberellin Regulatory Network in Immune Response of Potato to Potato virus Y Infection.

Križnik M, Petek M, Dobnik D, Ramšak Ž, Baebler Š, Pollmann S, Kreuze JF, Žel J, Gruden K. Križnik M, et al. Among authors: ramsak z. Front Plant Sci. 2017 Dec 22;8:2192. doi: 10.3389/fpls.2017.02192. eCollection 2017. Front Plant Sci. 2017. PMID: 29312421 Free PMC article.

8

Network Modeling Unravels Mechanisms of Crosstalk between Ethylene and Salicylate Signaling in Potato.

Ramšak Ž, Coll A, Stare T, Tzfadia O, Baebler Š, Van de Peer Y, Gruden K. Ramšak Ž, et al. Plant Physiol. 2018 Sep;178(1):488-499. doi: 10.1104/pp.18.00450. Epub 2018 Jun 22. Plant Physiol. 2018. PMID: 29934298 Free PMC article.

9

DiNAR: revealing hidden patterns of plant signalling dynamics using Differential Network Analysis in R.

Zagorščak M, Blejec A, Ramšak Ž, Petek M, Stare T, Gruden K. Zagorščak M, et al. Among authors: ramsak z. Plant Methods. 2018 Aug 30;14:78. doi: 10.1186/s13007-018-0345-0. eCollection 2018. Plant Methods. 2018. PMID: 30186360 Free PMC article.

10

Interactive exploration of heterogeneous biological networks with Biomine Explorer.

Podpečan V, Ramšak Ž, Gruden K, Toivonen H, Lavrač N. Podpečan V, et al. Among authors: ramsak z. Bioinformatics. 2019 Dec 15;35(24):5385-5388. doi: 10.1093/bioinformatics/btz509. Bioinformatics. 2019. PMID: 31233141 Free PMC article.

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