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High-performance web services for querying gene and variant annotation.
Xin J, Mark A, Afrasiabi C, Tsueng G, Juchler M, Gopal N, Stupp GS, Putman TE, Ainscough BJ, Griffith OL, Torkamani A, Whetzel PL, Mungall CJ, Mooney SD, Su AI, Wu C. Xin J, et al. Among authors: afrasiabi c. Genome Biol. 2016 May 6;17(1):91. doi: 10.1186/s13059-016-0953-9. Genome Biol. 2016. PMID: 27154141 Free PMC article.
ChlamBase: a curated model organism database for the Chlamydia research community.
Putman T, Hybiske K, Jow D, Afrasiabi C, Lelong S, Cano MA, Stupp GS, Waagmeester A, Good BM, Wu C, Su AI. Putman T, et al. Among authors: afrasiabi c. Database (Oxford). 2019 Jan 1;2019:baz091. doi: 10.1093/database/baz091. Database (Oxford). 2019. PMID: 31211397 Free PMC article. No abstract available.
A high resolution atlas of gene expression in the domestic sheep (Ovis aries).
Clark EL, Bush SJ, McCulloch MEB, Farquhar IL, Young R, Lefevre L, Pridans C, Tsang HG, Wu C, Afrasiabi C, Watson M, Whitelaw CB, Freeman TC, Summers KM, Archibald AL, Hume DA. Clark EL, et al. Among authors: afrasiabi c. PLoS Genet. 2017 Sep 15;13(9):e1006997. doi: 10.1371/journal.pgen.1006997. eCollection 2017 Sep. PLoS Genet. 2017. PMID: 28915238 Free PMC article.
PaVE 2.0: Behind the Scenes of the Papillomavirus Episteme.
Dommer J, Van Doorslaer K, Afrasiabi C, Browne K, Ezeji S, Kim L, Dolan M, McBride AA. Dommer J, et al. Among authors: afrasiabi c. J Mol Biol. 2024 Dec 26:168925. doi: 10.1016/j.jmb.2024.168925. Online ahead of print. J Mol Biol. 2024. PMID: 39732323