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A genome-wide association study of non-HPV-related head and neck squamous cell carcinoma identifies prognostic genetic sequence variants in the MAP-kinase and hormone pathways.
Azad AK, Bairati I, Qiu X, Girgis H, Cheng L, Waggott D, Cheng D, Mirshams M, Ho J, Fortin A, Vigneault E, Huang SH, O'Sullivan B, Waldron J, Boutros PC, Goldstein D, Meyer F, Xu W, Liu G. Azad AK, et al. Among authors: waggott d. Cancer Epidemiol. 2016 Jun;42:173-80. doi: 10.1016/j.canep.2016.05.001. Epub 2016 May 9. Cancer Epidemiol. 2016. PMID: 27173062
Integrated omic analysis of oropharyngeal carcinomas reveals human papillomavirus (HPV)-dependent regulation of the activator protein 1 (AP-1) pathway.
Sepiashvili L, Waggott D, Hui A, Shi W, Su S, Ignatchenko A, Ignatchenko V, Laureano M, Huang SH, Xu W, Weinreb I, Waldron J, O'Sullivan B, Irish JC, Boutros PC, Liu FF, Kislinger T. Sepiashvili L, et al. Among authors: waggott d. Mol Cell Proteomics. 2014 Dec;13(12):3572-84. doi: 10.1074/mcp.M114.041764. Epub 2014 Sep 30. Mol Cell Proteomics. 2014. PMID: 25271301 Free PMC article.
Developing a prognostic micro-RNA signature for human cervical carcinoma.
How C, Pintilie M, Bruce JP, Hui AB, Clarke BA, Wong P, Yin S, Yan R, Waggott D, Boutros PC, Fyles A, Hedley DW, Hill RP, Milosevic M, Liu FF. How C, et al. Among authors: waggott d. PLoS One. 2015 Apr 16;10(4):e0123946. doi: 10.1371/journal.pone.0123946. eCollection 2015. PLoS One. 2015. PMID: 25880806 Free PMC article.
Characterization of HPV and host genome interactions in primary head and neck cancers.
Parfenov M, Pedamallu CS, Gehlenborg N, Freeman SS, Danilova L, Bristow CA, Lee S, Hadjipanayis AG, Ivanova EV, Wilkerson MD, Protopopov A, Yang L, Seth S, Song X, Tang J, Ren X, Zhang J, Pantazi A, Santoso N, Xu AW, Mahadeshwar H, Wheeler DA, Haddad RI, Jung J, Ojesina AI, Issaeva N, Yarbrough WG, Hayes DN, Grandis JR, El-Naggar AK, Meyerson M, Park PJ, Chin L, Seidman JG, Hammerman PS, Kucherlapati R; Cancer Genome Atlas Network. Parfenov M, et al. Proc Natl Acad Sci U S A. 2014 Oct 28;111(43):15544-9. doi: 10.1073/pnas.1416074111. Epub 2014 Oct 13. Proc Natl Acad Sci U S A. 2014. PMID: 25313082 Free PMC article.
A bedr way of genomic interval processing.
Haider S, Waggott D, Lalonde E, Fung C, Liu FF, Boutros PC. Haider S, et al. Among authors: waggott d. Source Code Biol Med. 2016 Dec 15;11:14. doi: 10.1186/s13029-016-0059-5. eCollection 2016. Source Code Biol Med. 2016. PMID: 27999613 Free PMC article.
Erratum to: A bedr way of genomic interval processing.
Haider S, Waggott D, Lalonde E, Fung C, Liu FF, Boutros PC. Haider S, et al. Among authors: waggott d. Source Code Biol Med. 2017 Jan 9;12:1. doi: 10.1186/s13029-016-0061-y. eCollection 2017. Source Code Biol Med. 2017. PMID: 28077964 Free PMC article.
Novel PRKD gene rearrangements and variant fusions in cribriform adenocarcinoma of salivary gland origin.
Weinreb I, Zhang L, Tirunagari LM, Sung YS, Chen CL, Perez-Ordonez B, Clarke BA, Skalova A, Chiosea SI, Seethala RR, Waggott D, Boutros PC, How C, Liu FF, Irish JC, Goldstein DP, Gilbert R, Ud Din N, Assaad A, Hornick JL, Thompson LD, Antonescu CR. Weinreb I, et al. Among authors: waggott d. Genes Chromosomes Cancer. 2014 Oct;53(10):845-56. doi: 10.1002/gcc.22195. Epub 2014 Jun 18. Genes Chromosomes Cancer. 2014. PMID: 24942367
Systematic evaluation of medium-throughput mRNA abundance platforms.
Prokopec SD, Watson JD, Waggott DM, Smith AB, Wu AH, Okey AB, Pohjanvirta R, Boutros PC. Prokopec SD, et al. Among authors: waggott dm. RNA. 2013 Jan;19(1):51-62. doi: 10.1261/rna.034710.112. Epub 2012 Nov 20. RNA. 2013. PMID: 23169800 Free PMC article.
69 results