Cutillo L - Search Results

1

An atlas of gene expression and gene co-regulation in the human retina.

Pinelli M, Carissimo A, Cutillo L, Lai CH, Mutarelli M, Moretti MN, Singh MV, Karali M, Carrella D, Pizzo M, Russo F, Ferrari S, Ponzin D, Angelini C, Banfi S, di Bernardo D. Pinelli M, et al. Among authors: cutillo l. Nucleic Acids Res. 2016 Jul 8;44(12):5773-84. doi: 10.1093/nar/gkw486. Epub 2016 May 27. Nucleic Acids Res. 2016. PMID: 27235414 Free PMC article.

2

Reverse engineering a mouse embryonic stem cell-specific transcriptional network reveals a new modulator of neuronal differentiation.

De Cegli R, Iacobacci S, Flore G, Gambardella G, Mao L, Cutillo L, Lauria M, Klose J, Illingworth E, Banfi S, di Bernardo D. De Cegli R, et al. Among authors: cutillo l. Nucleic Acids Res. 2013 Jan;41(2):711-26. doi: 10.1093/nar/gks1136. Epub 2012 Nov 23. Nucleic Acids Res. 2013. PMID: 23180766 Free PMC article.

3

Mantra 2.0: an online collaborative resource for drug mode of action and repurposing by network analysis.

Carrella D, Napolitano F, Rispoli R, Miglietta M, Carissimo A, Cutillo L, Sirci F, Gregoretti F, Di Bernardo D. Carrella D, et al. Among authors: cutillo l. Bioinformatics. 2014 Jun 15;30(12):1787-8. doi: 10.1093/bioinformatics/btu058. Epub 2014 Feb 20. Bioinformatics. 2014. PMID: 24558125 Free article.

4

BATS: a Bayesian user-friendly software for analyzing time series microarray experiments.

Angelini C, Cutillo L, De Canditiis D, Mutarelli M, Pensky M. Angelini C, et al. Among authors: cutillo l. BMC Bioinformatics. 2008 Oct 6;9:415. doi: 10.1186/1471-2105-9-415. BMC Bioinformatics. 2008. PMID: 18837969 Free PMC article.

5

The impact of microRNAs on transcriptional heterogeneity and gene co-expression across single embryonic stem cells.

Gambardella G, Carissimo A, Chen A, Cutillo L, Nowakowski TJ, di Bernardo D, Blelloch R. Gambardella G, et al. Among authors: cutillo l. Nat Commun. 2017 Jan 19;8:14126. doi: 10.1038/ncomms14126. Nat Commun. 2017. PMID: 28102192 Free PMC article.

6

MicroRNA target prediction by expression analysis of host genes.

Gennarino VA, Sardiello M, Avellino R, Meola N, Maselli V, Anand S, Cutillo L, Ballabio A, Banfi S. Gennarino VA, et al. Among authors: cutillo l. Genome Res. 2009 Mar;19(3):481-90. doi: 10.1101/gr.084129.108. Epub 2008 Dec 16. Genome Res. 2009. PMID: 19088304 Free PMC article.

7

Network selection: a method for ranked lists selection.

Cutillo L, Carissimo A, Figini S. Cutillo L, et al. PLoS One. 2012;7(8):e43678. doi: 10.1371/journal.pone.0043678. Epub 2012 Aug 24. PLoS One. 2012. PMID: 22937075 Free PMC article.

8

Benchmark and Parameter Sensitivity Analysis of Single-Cell RNA Sequencing Clustering Methods.

Krzak M, Raykov Y, Boukouvalas A, Cutillo L, Angelini C. Krzak M, et al. Among authors: cutillo l. Front Genet. 2019 Dec 11;10:1253. doi: 10.3389/fgene.2019.01253. eCollection 2019. Front Genet. 2019. PMID: 31921297 Free PMC article.

9

Serotype-dependent packaging of large genes in adeno-associated viral vectors results in effective gene delivery in mice.

Allocca M, Doria M, Petrillo M, Colella P, Garcia-Hoyos M, Gibbs D, Kim SR, Maguire A, Rex TS, Di Vicino U, Cutillo L, Sparrow JR, Williams DS, Bennett J, Auricchio A. Allocca M, et al. Among authors: cutillo l. J Clin Invest. 2008 May;118(5):1955-64. doi: 10.1172/JCI34316. J Clin Invest. 2008. PMID: 18414684 Free PMC article.

10

Tbx1 is a negative modulator of Mef2c.

Pane LS, Zhang Z, Ferrentino R, Huynh T, Cutillo L, Baldini A. Pane LS, et al. Among authors: cutillo l. Hum Mol Genet. 2012 Jun 1;21(11):2485-96. doi: 10.1093/hmg/dds063. Epub 2012 Feb 24. Hum Mol Genet. 2012. PMID: 22367967 Free PMC article.

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