Mendes P - Search Results

1

Recon 2.2: from reconstruction to model of human metabolism.

Swainston N, Smallbone K, Hefzi H, Dobson PD, Brewer J, Hanscho M, Zielinski DC, Ang KS, Gardiner NJ, Gutierrez JM, Kyriakopoulos S, Lakshmanan M, Li S, Liu JK, Martínez VS, Orellana CA, Quek LE, Thomas A, Zanghellini J, Borth N, Lee DY, Nielsen LK, Kell DB, Lewis NE, Mendes P. Swainston N, et al. Among authors: mendes p. Metabolomics. 2016;12:109. doi: 10.1007/s11306-016-1051-4. Epub 2016 Jun 7. Metabolomics. 2016. PMID: 27358602 Free PMC article.

2

Channelling can decrease pool size.

Mendes P, Kell DB, Westerhoff HV. Mendes P, et al. Eur J Biochem. 1992 Feb 15;204(1):257-66. doi: 10.1111/j.1432-1033.1992.tb16632.x. Eur J Biochem. 1992. PMID: 1740137 Free article.

3

A series of cases in which metabolic channelling can decrease the pool size at constant net flux in a simple dynamic channel.

Mendes P, Kell DB, Westerhoff HV. Mendes P, et al. Biochem Soc Trans. 1995 May;23(2):287S. doi: 10.1042/bst023287s. Biochem Soc Trans. 1995. PMID: 7672313 No abstract available.

4

On the role of enzyme kinetic parameters in determining the effectiveness with which channelling can decrease the size of a metabolite pool.

Mendes P, Kell DB. Mendes P, et al. Acta Biotheor. 1993 Jun;41(1-2):63-73. doi: 10.1007/BF00712775. Acta Biotheor. 1993. PMID: 8266746

5

Why and when channelling can decrease pool size at constant net flux in a simple dynamic channel.

Mendes P, Kell DB, Westerhoff HV. Mendes P, et al. Biochim Biophys Acta. 1996 Mar 15;1289(2):175-86. doi: 10.1016/0304-4165(95)00152-2. Biochim Biophys Acta. 1996. PMID: 8600971

Biochem. 213, 87-92) have suggested that simulation results peviously published by us (Mendes, P., Kell, D.B. and Westerhoff, H.V. (1992) Eur. J. Biochem. 204, 255-266) which had demonstrated that large reductions of intermediate pool sizes could be accompanied by i …

Biochem. 213, 87-92) have suggested that simulation results peviously published by us (Mendes, P., Kell, D.B. and Westerhoff, …

6

On the analysis of the inverse problem of metabolic pathways using artificial neural networks.

Mendes P, Kell DB. Mendes P, et al. Biosystems. 1996;38(1):15-28. doi: 10.1016/0303-2647(95)01565-5. Biosystems. 1996. PMID: 8833745

7

Making cells work--metabolic engineering for everyone.

Mendes P, Kell D. Mendes P, et al. Trends Biotechnol. 1997 Jan;15(1):6-7. doi: 10.1016/S0167-7799(96)30030-9. Trends Biotechnol. 1997. PMID: 9032987 No abstract available.

8

Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation.

Mendes P, Kell D. Mendes P, et al. Bioinformatics. 1998;14(10):869-83. doi: 10.1093/bioinformatics/14.10.869. Bioinformatics. 1998. PMID: 9927716

9

MEG (Model Extender for Gepasi): a program for the modelling of complex, heterogeneous, cellular systems.

Mendes P, Kell DB. Mendes P, et al. Bioinformatics. 2001 Mar;17(3):288-9. doi: 10.1093/bioinformatics/17.3.288. Bioinformatics. 2001. PMID: 11294797

10

The markup is the model: reasoning about systems biology models in the Semantic Web era.

Kell DB, Mendes P. Kell DB, et al. Among authors: mendes p. J Theor Biol. 2008 Jun 7;252(3):538-43. doi: 10.1016/j.jtbi.2007.10.023. Epub 2007 Dec 3. J Theor Biol. 2008. PMID: 18054049 Review.

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