Koonin EV - Search Results

1

Germline viral "fossils" guide in silico reconstruction of a mid-Cenozoic era marsupial adeno-associated virus.

Smith RH, Hallwirth CV, Westerman M, Hetherington NA, Tseng YS, Cecchini S, Virag T, Ziegler ML, Rogozin IB, Koonin EV, Agbandje-McKenna M, Kotin RM, Alexander IE. Smith RH, et al. Among authors: koonin ev. Sci Rep. 2016 Jul 5;6:28965. doi: 10.1038/srep28965. Sci Rep. 2016. PMID: 27377618 Free PMC article.

2

Intron sliding in conserved gene families.

Rogozin IB, Lyons-Weiler J, Koonin EV. Rogozin IB, et al. Among authors: koonin ev. Trends Genet. 2000 Oct;16(10):430-2. doi: 10.1016/s0168-9525(00)02096-5. Trends Genet. 2000. PMID: 11050324 No abstract available.

3

Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context.

Wolf YI, Rogozin IB, Kondrashov AS, Koonin EV. Wolf YI, et al. Among authors: koonin ev. Genome Res. 2001 Mar;11(3):356-72. doi: 10.1101/gr.gr-1619r. Genome Res. 2001. PMID: 11230160 Free article.

4

Rapid evolution of a cyclin A inhibitor gene, roughex, in Drosophila.

Avedisov SN, Rogozin IB, Koonin EV, Thomas BJ. Avedisov SN, et al. Among authors: koonin ev. Mol Biol Evol. 2001 Nov;18(11):2110-8. doi: 10.1093/oxfordjournals.molbev.a003752. Mol Biol Evol. 2001. PMID: 11606707

5

Presence of ATG triplets in 5' untranslated regions of eukaryotic cDNAs correlates with a 'weak' context of the start codon.

Rogozin IB, Kochetov AV, Kondrashov FA, Koonin EV, Milanesi L. Rogozin IB, et al. Among authors: koonin ev. Bioinformatics. 2001 Oct;17(10):890-900. doi: 10.1093/bioinformatics/17.10.890. Bioinformatics. 2001. PMID: 11673233

6

Genome trees constructed using five different approaches suggest new major bacterial clades.

Wolf YI, Rogozin IB, Grishin NV, Tatusov RL, Koonin EV. Wolf YI, et al. Among authors: koonin ev. BMC Evol Biol. 2001 Oct 20;1:8. doi: 10.1186/1471-2148-1-8. BMC Evol Biol. 2001. PMID: 11734060 Free PMC article.

7

A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis.

Makarova KS, Aravind L, Grishin NV, Rogozin IB, Koonin EV. Makarova KS, et al. Among authors: koonin ev. Nucleic Acids Res. 2002 Jan 15;30(2):482-96. doi: 10.1093/nar/30.2.482. Nucleic Acids Res. 2002. PMID: 11788711 Free PMC article.

8

Constant relative rate of protein evolution and detection of functional diversification among bacterial, archaeal and eukaryotic proteins.

Jordan IK, Kondrashov FA, Rogozin IB, Tatusov RL, Wolf YI, Koonin EV. Jordan IK, et al. Among authors: koonin ev. Genome Biol. 2001;2(12):RESEARCH0053. doi: 10.1186/gb-2001-2-12-research0053. Epub 2001 Nov 20. Genome Biol. 2001. PMID: 11790256 Free PMC article.

9

Selection in the evolution of gene duplications.

Kondrashov FA, Rogozin IB, Wolf YI, Koonin EV. Kondrashov FA, et al. Among authors: koonin ev. Genome Biol. 2002;3(2):RESEARCH0008. doi: 10.1186/gb-2002-3-2-research0008. Epub 2002 Jan 14. Genome Biol. 2002. PMID: 11864370 Free PMC article.

10

Connected gene neighborhoods in prokaryotic genomes.

Rogozin IB, Makarova KS, Murvai J, Czabarka E, Wolf YI, Tatusov RL, Szekely LA, Koonin EV. Rogozin IB, et al. Among authors: koonin ev. Nucleic Acids Res. 2002 May 15;30(10):2212-23. doi: 10.1093/nar/30.10.2212. Nucleic Acids Res. 2002. PMID: 12000841 Free PMC article.

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