De Martino A - Search Results

1

Noise processing by microRNA-mediated circuits: The Incoherent Feed-Forward Loop, revisited.

Grigolon S, Di Patti F, De Martino A, Marinari E. Grigolon S, et al. Among authors: de martino a. Heliyon. 2016 Apr 6;2(4):e00095. doi: 10.1016/j.heliyon.2016.e00095. eCollection 2016 Apr. Heliyon. 2016. PMID: 27441269 Free PMC article.

2

Identifying essential genes in Escherichia coli from a metabolic optimization principle.

Martelli C, De Martino A, Marinari E, Marsili M, Pérez Castillo I. Martelli C, et al. Among authors: de martino a. Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2607-11. doi: 10.1073/pnas.0813229106. Epub 2009 Feb 5. Proc Natl Acad Sci U S A. 2009. PMID: 19196991 Free PMC article.

3

Optimal fluxes, reaction replaceability, and response to enzymopathies in the human red blood cell.

De Martino A, Granata D, Marinari E, Martelli C, Van Kerrebroeck V. De Martino A, et al. J Biomed Biotechnol. 2010;2010:415148. doi: 10.1155/2010/415148. Epub 2010 Jun 30. J Biomed Biotechnol. 2010. PMID: 20706609 Free PMC article.

4

A scalable algorithm to explore the Gibbs energy landscape of genome-scale metabolic networks.

De Martino D, Figliuzzi M, De Martino A, Marinari E. De Martino D, et al. Among authors: de martino a. PLoS Comput Biol. 2012;8(6):e1002562. doi: 10.1371/journal.pcbi.1002562. Epub 2012 Jun 21. PLoS Comput Biol. 2012. PMID: 22737065 Free PMC article.

5

MicroRNAs as a selective channel of communication between competing RNAs: a steady-state theory.

Figliuzzi M, Marinari E, De Martino A. Figliuzzi M, et al. Among authors: de martino a. Biophys J. 2013 Mar 5;104(5):1203-13. doi: 10.1016/j.bpj.2013.01.012. Biophys J. 2013. PMID: 23473503 Free PMC article.

6

Energy metabolism and glutamate-glutamine cycle in the brain: a stoichiometric modeling perspective.

Massucci FA, DiNuzzo M, Giove F, Maraviglia B, Castillo IP, Marinari E, De Martino A. Massucci FA, et al. Among authors: de martino a. BMC Syst Biol. 2013 Oct 10;7:103. doi: 10.1186/1752-0509-7-103. BMC Syst Biol. 2013. PMID: 24112710 Free PMC article.

7

Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks.

De Martino D, Capuani F, Mori M, De Martino A, Marinari E. De Martino D, et al. Among authors: de martino a. Metabolites. 2013 Oct 14;3(4):946-66. doi: 10.3390/metabo3040946. Metabolites. 2013. PMID: 24958259 Free PMC article.

8

RNA-based regulation: dynamics and response to perturbations of competing RNAs.

Figliuzzi M, De Martino A, Marinari E. Figliuzzi M, et al. Among authors: de martino a. Biophys J. 2014 Aug 19;107(4):1011-22. doi: 10.1016/j.bpj.2014.06.035. Biophys J. 2014. PMID: 25140437 Free PMC article.

9

Quantitative constraint-based computational model of tumor-to-stroma coupling via lactate shuttle.

Capuani F, De Martino D, Marinari E, De Martino A. Capuani F, et al. Among authors: de martino a, de martino d. Sci Rep. 2015 Jul 7;5:11880. doi: 10.1038/srep11880. Sci Rep. 2015. PMID: 26149467 Free PMC article.

10

Probing the Limits to MicroRNA-Mediated Control of Gene Expression.

Martirosyan A, Figliuzzi M, Marinari E, De Martino A. Martirosyan A, et al. Among authors: de martino a. PLoS Comput Biol. 2016 Jan 26;12(1):e1004715. doi: 10.1371/journal.pcbi.1004715. eCollection 2016 Jan. PLoS Comput Biol. 2016. PMID: 26812364 Free PMC article.

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