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Page 1
Comparative genomics of biotechnologically important yeasts.
Riley R, Haridas S, Wolfe KH, Lopes MR, Hittinger CT, Göker M, Salamov AA, Wisecaver JH, Long TM, Calvey CH, Aerts AL, Barry KW, Choi C, Clum A, Coughlan AY, Deshpande S, Douglass AP, Hanson SJ, Klenk HP, LaButti KM, Lapidus A, Lindquist EA, Lipzen AM, Meier-Kolthoff JP, Ohm RA, Otillar RP, Pangilinan JL, Peng Y, Rokas A, Rosa CA, Scheuner C, Sibirny AA, Slot JC, Stielow JB, Sun H, Kurtzman CP, Blackwell M, Grigoriev IV, Jeffries TW. Riley R, et al. Proc Natl Acad Sci U S A. 2016 Aug 30;113(35):9882-7. doi: 10.1073/pnas.1603941113. Epub 2016 Aug 17. Proc Natl Acad Sci U S A. 2016. PMID: 27535936 Free PMC article.
COPYCAT: cophylogenetic analysis tool.
Meier-Kolthoff JP, Auch AF, Huson DH, Göker M. Meier-Kolthoff JP, et al. Bioinformatics. 2007 Apr 1;23(7):898-900. doi: 10.1093/bioinformatics/btm027. Epub 2007 Jan 31. Bioinformatics. 2007. PMID: 17267434
Pathways and substrate-specific regulation of amino acid degradation in Phaeobacter inhibens DSM 17395 (archetype of the marine Roseobacter clade).
Drüppel K, Hensler M, Trautwein K, Koßmehl S, Wöhlbrand L, Schmidt-Hohagen K, Ulbrich M, Bergen N, Meier-Kolthoff JP, Göker M, Klenk HP, Schomburg D, Rabus R. Drüppel K, et al. Environ Microbiol. 2014 Jan;16(1):218-38. doi: 10.1111/1462-2920.12276. Epub 2013 Oct 27. Environ Microbiol. 2014. PMID: 24165547
Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)).
Meier-Kolthoff JP, Lu M, Huntemann M, Lucas S, Lapidus A, Copeland A, Pitluck S, Goodwin LA, Han C, Tapia R, Pötter G, Land M, Ivanova N, Rohde M, Göker M, Detter JC, Woyke T, Kyrpides NC, Klenk HP. Meier-Kolthoff JP, et al. Stand Genomic Sci. 2013 Sep 30;9(1):28-41. doi: 10.4056/sigs.4207886. eCollection 2013 Oct 16. Stand Genomic Sci. 2013. PMID: 24501643 Free PMC article.
Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio.
Palaniappan K, Meier-Kolthoff JP, Teshima H, Nolan M, Lapidus A, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Rohde M, Mayilraj S, Spring S, Detter JC, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T. Palaniappan K, et al. Stand Genomic Sci. 2013 Oct 2;9(1):57-70. doi: 10.4056/sigs.4237901. eCollection 2013 Oct 16. Stand Genomic Sci. 2013. PMID: 24501645 Free PMC article.
Complete genome sequence of DSM 30083(T), the type strain (U5/41(T)) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy.
Meier-Kolthoff JP, Hahnke RL, Petersen J, Scheuner C, Michael V, Fiebig A, Rohde C, Rohde M, Fartmann B, Goodwin LA, Chertkov O, Reddy T, Pati A, Ivanova NN, Markowitz V, Kyrpides NC, Woyke T, Göker M, Klenk HP. Meier-Kolthoff JP, et al. Stand Genomic Sci. 2014 Dec 8;9:2. doi: 10.1186/1944-3277-9-2. eCollection 2014. Stand Genomic Sci. 2014. PMID: 25780495 Free PMC article.
62 results