Smith RD - Search Results

1

Hypothalamic transcriptomes of 99 mouse strains reveal trans eQTL hotspots, splicing QTLs and novel non-coding genes.

Hasin-Brumshtein Y, Khan AH, Hormozdiari F, Pan C, Parks BW, Petyuk VA, Piehowski PD, Brümmer A, Pellegrini M, Xiao X, Eskin E, Smith RD, Lusis AJ, Smith DJ. Hasin-Brumshtein Y, et al. Among authors: smith rd, smith dj. Elife. 2016 Sep 13;5:e15614. doi: 10.7554/eLife.15614. Elife. 2016. PMID: 27623010 Free PMC article.

2

Development and evaluation of a micro- and nanoscale proteomic sample preparation method.

Wang H, Qian WJ, Mottaz HM, Clauss TR, Anderson DJ, Moore RJ, Camp DG 2nd, Khan AH, Sforza DM, Pallavicini M, Smith DJ, Smith RD. Wang H, et al. Among authors: smith rd, smith dj. J Proteome Res. 2005 Nov-Dec;4(6):2397-403. doi: 10.1021/pr050160f. J Proteome Res. 2005. PMID: 16335993 Free PMC article.

3

Characterization of the mouse brain proteome using global proteomic analysis complemented with cysteinyl-peptide enrichment.

Wang H, Qian WJ, Chin MH, Petyuk VA, Barry RC, Liu T, Gritsenko MA, Mottaz HM, Moore RJ, Camp Ii DG, Khan AH, Smith DJ, Smith RD. Wang H, et al. Among authors: smith rd, smith dj. J Proteome Res. 2006 Feb;5(2):361-9. doi: 10.1021/pr0503681. J Proteome Res. 2006. PMID: 16457602 Free PMC article.

4

Endogenously nitrated proteins in mouse brain: links to neurodegenerative disease.

Sacksteder CA, Qian WJ, Knyushko TV, Wang H, Chin MH, Lacan G, Melega WP, Camp DG 2nd, Smith RD, Smith DJ, Squier TC, Bigelow DJ. Sacksteder CA, et al. Among authors: smith rd, smith dj. Biochemistry. 2006 Jul 4;45(26):8009-22. doi: 10.1021/bi060474w. Biochemistry. 2006. PMID: 16800626

5

Robust algorithm for alignment of liquid chromatography-mass spectrometry analyses in an accurate mass and time tag data analysis pipeline.

Jaitly N, Monroe ME, Petyuk VA, Clauss TR, Adkins JN, Smith RD. Jaitly N, et al. Among authors: smith rd. Anal Chem. 2006 Nov 1;78(21):7397-409. doi: 10.1021/ac052197p. Anal Chem. 2006. PMID: 17073405

6

Mass measurement accuracy in analyses of highly complex mixtures based upon multidimensional recalibration.

Tolmachev AV, Monroe ME, Jaitly N, Petyuk VA, Adkins JN, Smith RD. Tolmachev AV, et al. Among authors: smith rd. Anal Chem. 2006 Dec 15;78(24):8374-85. doi: 10.1021/ac0606251. Anal Chem. 2006. PMID: 17165830

7

Spatial mapping of protein abundances in the mouse brain by voxelation integrated with high-throughput liquid chromatography-mass spectrometry.

Petyuk VA, Qian WJ, Chin MH, Wang H, Livesay EA, Monroe ME, Adkins JN, Jaitly N, Anderson DJ, Camp DG 2nd, Smith DJ, Smith RD. Petyuk VA, et al. Among authors: smith rd, smith dj. Genome Res. 2007 Mar;17(3):328-36. doi: 10.1101/gr.5799207. Epub 2007 Jan 25. Genome Res. 2007. PMID: 17255552 Free PMC article.

8

A method for selective enrichment and analysis of nitrotyrosine-containing peptides in complex proteome samples.

Zhang Q, Qian WJ, Knyushko TV, Clauss TR, Purvine SO, Moore RJ, Sacksteder CA, Chin MH, Smith DJ, Camp DG 2nd, Bigelow DJ, Smith RD. Zhang Q, et al. Among authors: smith rd, smith dj. J Proteome Res. 2007 Jun;6(6):2257-68. doi: 10.1021/pr0606934. Epub 2007 May 12. J Proteome Res. 2007. PMID: 17497906

9

A genome-scale map of expression for a mouse brain section obtained using voxelation.

Chin MH, Geng AB, Khan AH, Qian WJ, Petyuk VA, Boline J, Levy S, Toga AW, Smith RD, Leahy RM, Smith DJ. Chin MH, et al. Among authors: smith rd, smith dj. Physiol Genomics. 2007 Aug 20;30(3):313-21. doi: 10.1152/physiolgenomics.00287.2006. Epub 2007 May 15. Physiol Genomics. 2007. PMID: 17504947 Free PMC article.

10

Elimination of systematic mass measurement errors in liquid chromatography-mass spectrometry based proteomics using regression models and a priori partial knowledge of the sample content.

Petyuk VA, Jaitly N, Moore RJ, Ding J, Metz TO, Tang K, Monroe ME, Tolmachev AV, Adkins JN, Belov ME, Dabney AR, Qian WJ, Camp DG 2nd, Smith RD. Petyuk VA, et al. Among authors: smith rd. Anal Chem. 2008 Feb 1;80(3):693-706. doi: 10.1021/ac701863d. Epub 2007 Dec 29. Anal Chem. 2008. PMID: 18163597 Free PMC article.

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