den Bakker HC - Search Results

1

Comparative Genomics Reveals the Diversity of Restriction-Modification Systems and DNA Methylation Sites in Listeria monocytogenes.

Chen P, den Bakker HC, Korlach J, Kong N, Storey DB, Paxinos EE, Ashby M, Clark T, Luong K, Wiedmann M, Weimer BC. Chen P, et al. Among authors: den bakker hc. Appl Environ Microbiol. 2017 Jan 17;83(3):e02091-16. doi: 10.1128/AEM.02091-16. Print 2017 Feb 1. Appl Environ Microbiol. 2017. PMID: 27836852 Free PMC article.

2

Listeria monocytogenes lineages: Genomics, evolution, ecology, and phenotypic characteristics.

Orsi RH, den Bakker HC, Wiedmann M. Orsi RH, et al. Among authors: den bakker hc. Int J Med Microbiol. 2011 Feb;301(2):79-96. doi: 10.1016/j.ijmm.2010.05.002. Epub 2010 Aug 13. Int J Med Microbiol. 2011. PMID: 20708964 Review.

3

FSL J1-208, a virulent uncommon phylogenetic lineage IV Listeria monocytogenes strain with a small chromosome size and a putative virulence plasmid carrying internalin-like genes.

den Bakker HC, Bowen BM, Rodriguez-Rivera LD, Wiedmann M. den Bakker HC, et al. Appl Environ Microbiol. 2012 Mar;78(6):1876-89. doi: 10.1128/AEM.06969-11. Epub 2012 Jan 13. Appl Environ Microbiol. 2012. PMID: 22247147 Free PMC article.

4

Silage collected from dairy farms harbors an abundance of listeriaphages with considerable host range and genome size diversity.

Vongkamjan K, Switt AM, den Bakker HC, Fortes ED, Wiedmann M. Vongkamjan K, et al. Among authors: den bakker hc. Appl Environ Microbiol. 2012 Dec;78(24):8666-75. doi: 10.1128/AEM.01859-12. Epub 2012 Oct 5. Appl Environ Microbiol. 2012. PMID: 23042180 Free PMC article.

5

Selection and Characterization of Phage-Resistant Mutant Strains of Listeria monocytogenes Reveal Host Genes Linked to Phage Adsorption.

Denes T, den Bakker HC, Tokman JI, Guldimann C, Wiedmann M. Denes T, et al. Among authors: den bakker hc. Appl Environ Microbiol. 2015 Jul;81(13):4295-305. doi: 10.1128/AEM.00087-15. Epub 2015 Apr 17. Appl Environ Microbiol. 2015. PMID: 25888172 Free PMC article.

6

Whole-Genome Sequencing Allows for Improved Identification of Persistent Listeria monocytogenes in Food-Associated Environments.

Stasiewicz MJ, Oliver HF, Wiedmann M, den Bakker HC. Stasiewicz MJ, et al. Among authors: den bakker hc. Appl Environ Microbiol. 2015 Sep 1;81(17):6024-37. doi: 10.1128/AEM.01049-15. Epub 2015 Jun 26. Appl Environ Microbiol. 2015. PMID: 26116683 Free PMC article.

7

Transcriptomic Analysis of the Adaptation of Listeria monocytogenes to Growth on Vacuum-Packed Cold Smoked Salmon.

Tang S, Orsi RH, den Bakker HC, Wiedmann M, Boor KJ, Bergholz TM. Tang S, et al. Among authors: den bakker hc. Appl Environ Microbiol. 2015 Oct;81(19):6812-24. doi: 10.1128/AEM.01752-15. Epub 2015 Jul 24. Appl Environ Microbiol. 2015. PMID: 26209664 Free PMC article.

8

Whole-Genome Sequencing of Drug-Resistant Salmonella enterica Isolates from Dairy Cattle and Humans in New York and Washington States Reveals Source and Geographic Associations.

Carroll LM, Wiedmann M, den Bakker H, Siler J, Warchocki S, Kent D, Lyalina S, Davis M, Sischo W, Besser T, Warnick LD, Pereira RV. Carroll LM, et al. Appl Environ Microbiol. 2017 May 31;83(12):e00140-17. doi: 10.1128/AEM.00140-17. Print 2017 Jun 15. Appl Environ Microbiol. 2017. PMID: 28389536 Free PMC article.

9

Molecular ecology of Listeria spp., Salmonella, Escherichia coli O157:H7 and non-O157 Shiga toxin-producing E. coli in pristine natural environments in Northern Colorado.

Ahlstrom CA, Manuel CS, Den Bakker HC, Wiedmann M, Nightingale KK. Ahlstrom CA, et al. Among authors: den bakker hc. J Appl Microbiol. 2018 Feb;124(2):511-521. doi: 10.1111/jam.13657. J Appl Microbiol. 2018. PMID: 29215770

10

Lineage specific recombination rates and microevolution in Listeria monocytogenes.

den Bakker HC, Didelot X, Fortes ED, Nightingale KK, Wiedmann M. den Bakker HC, et al. BMC Evol Biol. 2008 Oct 8;8:277. doi: 10.1186/1471-2148-8-277. BMC Evol Biol. 2008. PMID: 18842152 Free PMC article.

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