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Extensive folding variability between homologous chromosomes in mammalian cells.
Irastorza-Azcarate I, Kukalev A, Kempfer R, Thieme CJ, Mastrobuoni G, Markowski J, Loof G, Sparks TM, Brookes E, Natarajan KN, Sauer S, Fisher AG, Nicodemi M, Ren B, Schwarz RF, Kempa S, Pombo A. Irastorza-Azcarate I, et al. Among authors: nicodemi m. bioRxiv [Preprint]. 2024 May 10:2024.05.08.591087. doi: 10.1101/2024.05.08.591087. bioRxiv. 2024. PMID: 38766012 Free PMC article. Preprint.
Flow, ordering, and jamming of sheared granular suspensions.
Grebenkov DS, Ciamarra MP, Nicodemi M, Coniglio A. Grebenkov DS, et al. Among authors: nicodemi m. Phys Rev Lett. 2008 Feb 22;100(7):078001. doi: 10.1103/PhysRevLett.100.078001. Epub 2008 Feb 19. Phys Rev Lett. 2008. PMID: 18352596
A model of the large-scale organization of chromatin.
Barbieri M, Chotalia M, Fraser J, Lavitas LM, Dostie J, Pombo A, Nicodemi M. Barbieri M, et al. Among authors: nicodemi m. Biochem Soc Trans. 2013 Apr;41(2):508-12. doi: 10.1042/BST20120238. Biochem Soc Trans. 2013. PMID: 23514144 Review.
Polymer models of chromatin organization.
Barbieri M, Scialdone A, Piccolo A, Chiariello AM, di Lanno C, Prisco A, Pombo A, Nicodemi M. Barbieri M, et al. Among authors: nicodemi m. Front Genet. 2013 Jun 20;4:113. doi: 10.3389/fgene.2013.00113. eCollection 2013. Front Genet. 2013. PMID: 23802011 Free PMC article. No abstract available.
Models of chromosome structure.
Nicodemi M, Pombo A. Nicodemi M, et al. Curr Opin Cell Biol. 2014 Jun;28:90-5. doi: 10.1016/j.ceb.2014.04.004. Epub 2014 May 4. Curr Opin Cell Biol. 2014. PMID: 24804566 Free article. Review.
Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation.
Fraser J, Ferrai C, Chiariello AM, Schueler M, Rito T, Laudanno G, Barbieri M, Moore BL, Kraemer DC, Aitken S, Xie SQ, Morris KJ, Itoh M, Kawaji H, Jaeger I, Hayashizaki Y, Carninci P, Forrest AR; FANTOM Consortium; Semple CA, Dostie J, Pombo A, Nicodemi M. Fraser J, et al. Among authors: nicodemi m. Mol Syst Biol. 2015 Dec 23;11(12):852. doi: 10.15252/msb.20156492. Mol Syst Biol. 2015. PMID: 26700852 Free PMC article.
109 results