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Page 1
G-quadruplex formation in the Oct4 promoter positively regulates Oct4 expression.
Renčiuk D, Ryneš J, Kejnovská I, Foldynová-Trantírková S, Andäng M, Trantírek L, Vorlíčková M. Renčiuk D, et al. Among authors: rynes j. Biochim Biophys Acta Gene Regul Mech. 2017 Feb;1860(2):175-183. doi: 10.1016/j.bbagrm.2016.11.002. Epub 2016 Nov 15. Biochim Biophys Acta Gene Regul Mech. 2017. PMID: 27863263
Advances in the cellular structural biology of nucleic acids.
Giassa IC, Rynes J, Fessl T, Foldynova-Trantirkova S, Trantirek L. Giassa IC, et al. Among authors: rynes j. FEBS Lett. 2018 Jun;592(12):1997-2011. doi: 10.1002/1873-3468.13054. Epub 2018 May 2. FEBS Lett. 2018. PMID: 29679394 Free article. Review.
Dishevelled-3 conformation dynamics analyzed by FRET-based biosensors reveals a key role of casein kinase 1.
Harnoš J, Cañizal MCA, Jurásek M, Kumar J, Holler C, Schambony A, Hanáková K, Bernatík O, Zdráhal Z, Gömöryová K, Gybeľ T, Radaszkiewicz TW, Kravec M, Trantírek L, Ryneš J, Dave Z, Fernández-Llamazares AI, Vácha R, Tripsianes K, Hoffmann C, Bryja V. Harnoš J, et al. Among authors: rynes j. Nat Commun. 2019 Apr 18;10(1):1804. doi: 10.1038/s41467-019-09651-7. Nat Commun. 2019. PMID: 31000703 Free PMC article.
Composite 5-methylations of cytosines modulate i-motif stability in a sequence-specific manner: Implications for DNA nanotechnology and epigenetic regulation of plant telomeric DNA.
Školáková P, Badri Z, Foldynová-Trantírková S, Ryneš J, Šponer J, Fojtová M, Fajkus J, Marek R, Vorlíčková M, Mergny JL, Trantírek L. Školáková P, et al. Among authors: rynes j. Biochim Biophys Acta Gen Subj. 2020 Sep;1864(9):129651. doi: 10.1016/j.bbagen.2020.129651. Epub 2020 May 31. Biochim Biophys Acta Gen Subj. 2020. PMID: 32492502
A sodium/potassium switch for G4-prone G/C-rich sequences.
Luo Y, Živković ML, Wang J, Ryneš J, Foldynová-Trantírková S, Trantírek L, Verga D, Mergny JL. Luo Y, et al. Among authors: rynes j. Nucleic Acids Res. 2024 Jan 11;52(1):448-461. doi: 10.1093/nar/gkad1073. Nucleic Acids Res. 2024. PMID: 37986223 Free PMC article.
In-cell NMR suggests that DNA i-motif levels are strongly depleted in living human cells.
Víšková P, Ištvánková E, Ryneš J, Džatko Š, Loja T, Živković ML, Rigo R, El-Khoury R, Serrano-Chacón I, Damha MJ, González C, Mergny JL, Foldynová-Trantírková S, Trantírek L. Víšková P, et al. Among authors: rynes j. Nat Commun. 2024 Mar 5;15(1):1992. doi: 10.1038/s41467-024-46221-y. Nat Commun. 2024. PMID: 38443388 Free PMC article.
Specific inhibition of fibroblast growth factor receptor 1 signaling by a DNA aptamer.
Zlinska V, Feketova Z, Czyrek A, Chudzian J, Zivkovic ML, Ursachi VC, Dudeja P, Fafilek B, Rynes J, Rico-Llanos G, Koudelka A, Roy T, Biadun M, Raskova V, Svozilova K, Stroblova M, Krzyscik M, Hristova K, Krowarsch D, Foldynova-Trantirkova S, Zakrzewska M, Trantirek L, Krejci P. Zlinska V, et al. Among authors: rynes j. Mol Ther Nucleic Acids. 2024 Nov 28;36(1):102405. doi: 10.1016/j.omtn.2024.102405. eCollection 2025 Mar 11. Mol Ther Nucleic Acids. 2024. PMID: 39759879 Free PMC article.
13 results