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Application of sorting and next generation sequencing to study 5΄-UTR influence on translation efficiency in Escherichia coli.
Evfratov SA, Osterman IA, Komarova ES, Pogorelskaya AM, Rubtsova MP, Zatsepin TS, Semashko TA, Kostryukova ES, Mironov AA, Burnaev E, Krymova E, Gelfand MS, Govorun VM, Bogdanov AA, Sergiev PV, Dontsova OA. Evfratov SA, et al. Among authors: kostryukova es. Nucleic Acids Res. 2017 Apr 7;45(6):3487-3502. doi: 10.1093/nar/gkw1141. Nucleic Acids Res. 2017. PMID: 27899632 Free PMC article.
Influence of the spacer region between the Shine-Dalgarno box and the start codon for fine-tuning of the translation efficiency in Escherichia coli.
Komarova ES, Chervontseva ZS, Osterman IA, Evfratov SA, Rubtsova MP, Zatsepin TS, Semashko TA, Kostryukova ES, Bogdanov AA, Gelfand MS, Dontsova OA, Sergiev PV. Komarova ES, et al. Among authors: kostryukova es. Microb Biotechnol. 2020 Jul;13(4):1254-1261. doi: 10.1111/1751-7915.13561. Epub 2020 Mar 23. Microb Biotechnol. 2020. PMID: 32202698 Free PMC article.
Genome analysis of E. coli isolated from Crohn's disease patients.
Rakitina DV, Manolov AI, Kanygina AV, Garushyants SK, Baikova JP, Alexeev DG, Ladygina VG, Kostryukova ES, Larin AK, Semashko TA, Karpova IY, Babenko VV, Ismagilova RK, Malanin SY, Gelfand MS, Ilina EN, Gorodnichev RB, Lisitsyna ES, Aleshkin GI, Scherbakov PL, Khalif IL, Shapina MV, Maev IV, Andreev DN, Govorun VM. Rakitina DV, et al. Among authors: kostryukova es. BMC Genomics. 2017 Jul 19;18(1):544. doi: 10.1186/s12864-017-3917-x. BMC Genomics. 2017. PMID: 28724357 Free PMC article.
Ultrahigh-throughput functional profiling of microbiota communities.
Terekhov SS, Smirnov IV, Malakhova MV, Samoilov AE, Manolov AI, Nazarov AS, Danilov DV, Dubiley SA, Osterman IA, Rubtsova MP, Kostryukova ES, Ziganshin RH, Kornienko MA, Vanyushkina AA, Bukato ON, Ilina EN, Vlasov VV, Severinov KV, Gabibov AG, Altman S. Terekhov SS, et al. Among authors: kostryukova es. Proc Natl Acad Sci U S A. 2018 Sep 18;115(38):9551-9556. doi: 10.1073/pnas.1811250115. Epub 2018 Sep 4. Proc Natl Acad Sci U S A. 2018. PMID: 30181282 Free PMC article.
RNA-Seq gene expression profiling of HepG2 cells: the influence of experimental factors and comparison with liver tissue.
Tyakht AV, Ilina EN, Alexeev DG, Ischenko DS, Gorbachev AY, Semashko TA, Larin AK, Selezneva OV, Kostryukova ES, Karalkin PA, Vakhrushev IV, Kurbatov LK, Archakov AI, Govorun VM. Tyakht AV, et al. Among authors: kostryukova es. BMC Genomics. 2014 Dec 15;15(1):1108. doi: 10.1186/1471-2164-15-1108. BMC Genomics. 2014. PMID: 25511409 Free PMC article.
Rural and urban microbiota: To be or not to be?
Tyakht AV, Alexeev DG, Popenko AS, Kostryukova ES, Govorun VM. Tyakht AV, et al. Among authors: kostryukova es. Gut Microbes. 2014 May-Jun;5(3):351-6. doi: 10.4161/gmic.28685. Epub 2014 Apr 1. Gut Microbes. 2014. PMID: 24691073 Free PMC article.
Draft genome sequences of Hirudo medicinalis and salivary transcriptome of three closely related medicinal leeches.
Babenko VV, Podgorny OV, Manuvera VA, Kasianov AS, Manolov AI, Grafskaia EN, Shirokov DA, Kurdyumov AS, Vinogradov DV, Nikitina AS, Kovalchuk SI, Anikanov NA, Butenko IO, Pobeguts OV, Matyushkina DS, Rakitina DV, Kostryukova ES, Zgoda VG, Baskova IP, Trukhan VM, Gelfand MS, Govorun VM, Schiöth HB, Lazarev VN. Babenko VV, et al. Among authors: kostryukova es. BMC Genomics. 2020 Apr 29;21(1):331. doi: 10.1186/s12864-020-6748-0. BMC Genomics. 2020. PMID: 32349672 Free PMC article.
Correction to: Draft genome sequences of Hirudo medicinalis and salivary transcriptome of three closely related medicinal leeches.
Babenko VV, Podgorny OV, Manuvera VA, Kasianov AS, Manolov AI, Grafskaia EN, Shirokov DA, Kurdyumov AS, Vinogradov DV, Nikitina AS, Kovalchuk SI, Anikanov NA, Butenko IO, Pobeguts OV, Matyushkina DS, Rakitina DV, Kostryukova ES, Zgoda VG, Baskova IP, Trukhan VM, Gelfand MS, Govorun VM, Schiöth HB, Lazarev VN. Babenko VV, et al. Among authors: kostryukova es. BMC Genomics. 2020 Jul 22;21(1):503. doi: 10.1186/s12864-020-06897-0. BMC Genomics. 2020. PMID: 32698877 Free PMC article.
Isolation of single Chlamydia-infected cells using laser microdissection.
Podgorny OV, Polina NF, Babenko VV, Karpova IY, Kostryukova ES, Govorun VM, Lazarev VN. Podgorny OV, et al. Among authors: kostryukova es. J Microbiol Methods. 2015 Feb;109:123-8. doi: 10.1016/j.mimet.2014.12.018. Epub 2014 Dec 26. J Microbiol Methods. 2015. PMID: 25546842
87 results