Marchal K - Search Results

1

Network-based integration of systems genetics data reveals pathways associated with lignocellulosic biomass accumulation and processing.

Mizrachi E, Verbeke L, Christie N, Fierro AC, Mansfield SD, Davis MF, Gjersing E, Tuskan GA, Van Montagu M, Van de Peer Y, Marchal K, Myburg AA. Mizrachi E, et al. Among authors: marchal k. Proc Natl Acad Sci U S A. 2017 Jan 31;114(5):1195-1200. doi: 10.1073/pnas.1620119114. Epub 2017 Jan 17. Proc Natl Acad Sci U S A. 2017. PMID: 28096391 Free PMC article.

2

Computational approaches to identify promoters and cis-regulatory elements in plant genomes.

Rombauts S, Florquin K, Lescot M, Marchal K, Rouzé P, van de Peer Y. Rombauts S, et al. Among authors: marchal k. Plant Physiol. 2003 Jul;132(3):1162-76. doi: 10.1104/pp.102.017715. Plant Physiol. 2003. PMID: 12857799 Free PMC article. Review.

3

Validating module network learning algorithms using simulated data.

Michoel T, Maere S, Bonnet E, Joshi A, Saeys Y, Van den Bulcke T, Van Leemput K, van Remortel P, Kuiper M, Marchal K, Van de Peer Y. Michoel T, et al. Among authors: marchal k. BMC Bioinformatics. 2007 May 3;8 Suppl 2(Suppl 2):S5. doi: 10.1186/1471-2105-8-S2-S5. BMC Bioinformatics. 2007. PMID: 17493254 Free PMC article.

4

Module networks revisited: computational assessment and prioritization of model predictions.

Joshi A, De Smet R, Marchal K, Van de Peer Y, Michoel T. Joshi A, et al. Among authors: marchal k. Bioinformatics. 2009 Feb 15;25(4):490-6. doi: 10.1093/bioinformatics/btn658. Epub 2009 Jan 9. Bioinformatics. 2009. PMID: 19136553

5

Reverse-engineering transcriptional modules from gene expression data.

Michoel T, De Smet R, Joshi A, Marchal K, Van de Peer Y. Michoel T, et al. Among authors: marchal k. Ann N Y Acad Sci. 2009 Mar;1158:36-43. doi: 10.1111/j.1749-6632.2008.03943.x. Ann N Y Acad Sci. 2009. PMID: 19348630

6

Comparative analysis of module-based versus direct methods for reverse-engineering transcriptional regulatory networks.

Michoel T, De Smet R, Joshi A, Van de Peer Y, Marchal K. Michoel T, et al. Among authors: marchal k. BMC Syst Biol. 2009 May 7;3:49. doi: 10.1186/1752-0509-3-49. BMC Syst Biol. 2009. PMID: 19422680 Free PMC article.

7

Meta Analysis of Gene Expression Data within and Across Species.

Fierro AC, Vandenbussche F, Engelen K, Van de Peer Y, Marchal K. Fierro AC, et al. Among authors: marchal k. Curr Genomics. 2008 Dec;9(8):525-34. doi: 10.2174/138920208786847935. Curr Genomics. 2008. PMID: 19516959 Free PMC article.

8

Inferring the transcriptional network of Bacillus subtilis.

Fadda A, Fierro AC, Lemmens K, Monsieurs P, Engelen K, Marchal K. Fadda A, et al. Among authors: marchal k. Mol Biosyst. 2009 Dec;5(12):1840-52. doi: 10.1039/b907310h. Epub 2009 Jul 28. Mol Biosyst. 2009. PMID: 20023724

9

Module network inference from a cancer gene expression data set identifies microRNA regulated modules.

Bonnet E, Tatari M, Joshi A, Michoel T, Marchal K, Berx G, Van de Peer Y. Bonnet E, et al. Among authors: marchal k. PLoS One. 2010 Apr 14;5(4):e10162. doi: 10.1371/journal.pone.0010162. PLoS One. 2010. PMID: 20418949 Free PMC article.

10

The potential for pathogenicity was present in the ancestor of the Ascomycete subphylum Pezizomycotina.

Sánchez-Rodríguez A, Martens C, Engelen K, Van de Peer Y, Marchal K. Sánchez-Rodríguez A, et al. Among authors: marchal k. BMC Evol Biol. 2010 Oct 21;10:318. doi: 10.1186/1471-2148-10-318. BMC Evol Biol. 2010. PMID: 20964831 Free PMC article.

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