Shakir DI - Search Results

1

GIFT-Cloud: A data sharing and collaboration platform for medical imaging research.

Doel T, Shakir DI, Pratt R, Aertsen M, Moggridge J, Bellon E, David AL, Deprest J, Vercauteren T, Ourselin S. Doel T, et al. Among authors: shakir di. Comput Methods Programs Biomed. 2017 Feb;139:181-190. doi: 10.1016/j.cmpb.2016.11.004. Epub 2016 Nov 10. Comput Methods Programs Biomed. 2017. PMID: 28187889 Free PMC article.

2

Medical-grade Sterilizable Target for Fluid-immersed Fetoscope Optical Distortion Calibration.

Nikitichev DI, Shakir DI, Chadebecq F, Tella M, Deprest J, Stoyanov D, Ourselin S, Vercauteren T. Nikitichev DI, et al. Among authors: shakir di. J Vis Exp. 2017 Feb 23;(120):55298. doi: 10.3791/55298. J Vis Exp. 2017. PMID: 28287588 Free PMC article.

3

Probabilistic visual and electromagnetic data fusion for robust drift-free sequential mosaicking: application to fetoscopy.

Tella-Amo M, Peter L, Shakir DI, Deprest J, Stoyanov D, Iglesias JE, Vercauteren T, Ourselin S. Tella-Amo M, et al. Among authors: shakir di. J Med Imaging (Bellingham). 2018 Apr;5(2):021217. doi: 10.1117/1.JMI.5.2.021217. Epub 2018 Feb 22. J Med Imaging (Bellingham). 2018. PMID: 29487889 Free PMC article.

4

NiftyNet: a deep-learning platform for medical imaging.

Gibson E, Li W, Sudre C, Fidon L, Shakir DI, Wang G, Eaton-Rosen Z, Gray R, Doel T, Hu Y, Whyntie T, Nachev P, Modat M, Barratt DC, Ourselin S, Cardoso MJ, Vercauteren T. Gibson E, et al. Among authors: shakir di. Comput Methods Programs Biomed. 2018 May;158:113-122. doi: 10.1016/j.cmpb.2018.01.025. Epub 2018 Jan 31. Comput Methods Programs Biomed. 2018. PMID: 29544777 Free PMC article.

5

Retrieval and registration of long-range overlapping frames for scalable mosaicking of in vivo fetoscopy.

Peter L, Tella-Amo M, Shakir DI, Attilakos G, Wimalasundera R, Deprest J, Ourselin S, Vercauteren T. Peter L, et al. Among authors: shakir di. Int J Comput Assist Radiol Surg. 2018 May;13(5):713-720. doi: 10.1007/s11548-018-1728-4. Epub 2018 Mar 15. Int J Comput Assist Radiol Surg. 2018. PMID: 29546573 Free PMC article.

6

Effective deep learning training for single-image super-resolution in endomicroscopy exploiting video-registration-based reconstruction.

Ravì D, Szczotka AB, Shakir DI, Pereira SP, Vercauteren T. Ravì D, et al. Among authors: shakir di. Int J Comput Assist Radiol Surg. 2018 Jun;13(6):917-924. doi: 10.1007/s11548-018-1764-0. Epub 2018 Apr 23. Int J Comput Assist Radiol Surg. 2018. PMID: 29687176 Free PMC article.

7

Pruning strategies for efficient online globally consistent mosaicking in fetoscopy.

Tella-Amo M, Peter L, Shakir DI, Deprest J, Stoyanov D, Vercauteren T, Ourselin S. Tella-Amo M, et al. Among authors: shakir di. J Med Imaging (Bellingham). 2019 Jul;6(3):035001. doi: 10.1117/1.JMI.6.3.035001. Epub 2019 Aug 7. J Med Imaging (Bellingham). 2019. PMID: 31403054 Free PMC article.

8

Learning from irregularly sampled data for endomicroscopy super-resolution: a comparative study of sparse and dense approaches.

Szczotka AB, Shakir DI, Ravì D, Clarkson MJ, Pereira SP, Vercauteren T. Szczotka AB, et al. Among authors: shakir di. Int J Comput Assist Radiol Surg. 2020 Jul;15(7):1167-1175. doi: 10.1007/s11548-020-02170-7. Epub 2020 May 15. Int J Comput Assist Radiol Surg. 2020. PMID: 32415459 Free PMC article.

9

Zero-Shot Super-Resolution With a Physically-Motivated Downsampling Kernel for Endomicroscopy.

Szczotka AB, Shakir DI, Clarkson MJ, Pereira SP, Vercauteren T. Szczotka AB, et al. Among authors: shakir di. IEEE Trans Med Imaging. 2021 Jul;40(7):1863-1874. doi: 10.1109/TMI.2021.3067512. Epub 2021 Jun 30. IEEE Trans Med Imaging. 2021. PMID: 33739921 Free PMC article.

10

Ultrasonic Needle Tracking with Dynamic Electronic Focusing.

Mathews SJ, Shakir DI, Mosse CA, Xia W, Zhang EZ, Beard PC, West SJ, David AL, Ourselin S, Vercauteren T, Desjardins A. Mathews SJ, et al. Among authors: shakir di. Ultrasound Med Biol. 2022 Mar;48(3):520-529. doi: 10.1016/j.ultrasmedbio.2021.11.008. Epub 2021 Dec 30. Ultrasound Med Biol. 2022. PMID: 34974926

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