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A magnesium-induced triplex pre-organizes the SAM-II riboswitch.
Roy S, Lammert H, Hayes RL, Chen B, LeBlanc R, Dayie TK, Onuchic JN, Sanbonmatsu KY. Roy S, et al. PLoS Comput Biol. 2017 Mar 1;13(3):e1005406. doi: 10.1371/journal.pcbi.1005406. eCollection 2017 Mar. PLoS Comput Biol. 2017. PMID: 28248966 Free PMC article.
Structural and Dynamical Order of a Disordered Protein: Molecular Insights into Conformational Switching of PAGE4 at the Systems Level.
Lin X, Kulkarni P, Bocci F, Schafer NP, Roy S, Tsai MY, He Y, Chen Y, Rajagopalan K, Mooney SM, Zeng Y, Weninger K, Grishaev A, Onuchic JN, Levine H, Wolynes PG, Salgia R, Rangarajan G, Uversky V, Orban J, Jolly MK. Lin X, et al. Among authors: roy s. Biomolecules. 2019 Feb 22;9(2):77. doi: 10.3390/biom9020077. Biomolecules. 2019. PMID: 30813315 Free PMC article.
Redox-dependent gating of VDAC by mitoNEET.
Lipper CH, Stofleth JT, Bai F, Sohn YS, Roy S, Mittler R, Nechushtai R, Onuchic JN, Jennings PA. Lipper CH, et al. Among authors: roy s. Proc Natl Acad Sci U S A. 2019 Oct 1;116(40):19924-19929. doi: 10.1073/pnas.1908271116. Epub 2019 Sep 16. Proc Natl Acad Sci U S A. 2019. PMID: 31527235 Free PMC article.
Chelated Magnesium Logic Gate Regulates Riboswitch Pseudoknot Formation.
Sarkar R, Jaiswar A, Hennelly SP, Onuchic JN, Sanbonmatsu KY, Roy S. Sarkar R, et al. Among authors: roy s. J Phys Chem B. 2021 Jun 24;125(24):6479-6490. doi: 10.1021/acs.jpcb.1c02467. Epub 2021 Jun 9. J Phys Chem B. 2021. PMID: 34106719 Free PMC article.
A VDAC1-mediated NEET protein chain transfers [2Fe-2S] clusters between the mitochondria and the cytosol and impacts mitochondrial dynamics.
Karmi O, Marjault HB, Bai F, Roy S, Sohn YS, Darash Yahana M, Morcos F, Ioannidis K, Nahmias Y, Jennings PA, Mittler R, Onuchic JN, Nechushtai R. Karmi O, et al. Among authors: roy s. Proc Natl Acad Sci U S A. 2022 Feb 15;119(7):e2121491119. doi: 10.1073/pnas.2121491119. Proc Natl Acad Sci U S A. 2022. PMID: 35135884 Free PMC article.
Intrinsically disordered proteins: Ensembles at the limits of Anfinsen's dogma.
Kulkarni P, Leite VBP, Roy S, Bhattacharyya S, Mohanty A, Achuthan S, Singh D, Appadurai R, Rangarajan G, Weninger K, Orban J, Srivastava A, Jolly MK, Onuchic JN, Uversky VN, Salgia R. Kulkarni P, et al. Among authors: roy s. Biophys Rev (Melville). 2022 Mar 17;3(1):011306. doi: 10.1063/5.0080512. eCollection 2022 Mar. Biophys Rev (Melville). 2022. PMID: 38505224 Free PMC article. Review.
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