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Correcting for cell-type effects in DNA methylation studies: reference-based method outperforms latent variable approaches in empirical studies.
Hattab MW, Shabalin AA, Clark SL, Zhao M, Kumar G, Chan RF, Xie LY, Jansen R, Han LK, Magnusson PK, van Grootheest G, Hultman CM, Penninx BW, Aberg KA, van den Oord EJ. Hattab MW, et al. Among authors: zhao m. Genome Biol. 2017 Jan 30;18(1):24. doi: 10.1186/s13059-017-1148-8. Genome Biol. 2017. PMID: 28137292 Free PMC article.
Epigenetic Aging in Major Depressive Disorder.
Han LKM, Aghajani M, Clark SL, Chan RF, Hattab MW, Shabalin AA, Zhao M, Kumar G, Xie LY, Jansen R, Milaneschi Y, Dean B, Aberg KA, van den Oord EJCG, Penninx BWJH. Han LKM, et al. Among authors: zhao m. Am J Psychiatry. 2018 Aug 1;175(8):774-782. doi: 10.1176/appi.ajp.2018.17060595. Epub 2018 Apr 16. Am J Psychiatry. 2018. PMID: 29656664 Free PMC article.
Methylome-wide association findings for major depressive disorder overlap in blood and brain and replicate in independent brain samples.
Aberg KA, Dean B, Shabalin AA, Chan RF, Han LKM, Zhao M, van Grootheest G, Xie LY, Milaneschi Y, Clark SL, Turecki G, Penninx BWJH, van den Oord EJCG. Aberg KA, et al. Among authors: zhao m. Mol Psychiatry. 2020 Jun;25(6):1344-1354. doi: 10.1038/s41380-018-0247-6. Epub 2018 Sep 21. Mol Psychiatry. 2020. PMID: 30242228 Free PMC article.
A methylation study of long-term depression risk.
Clark SL, Hattab MW, Chan RF, Shabalin AA, Han LKM, Zhao M, Smit JH, Jansen R, Milaneschi Y, Xie LY, van Grootheest G, Penninx BWJH, Aberg KA, van den Oord EJCG. Clark SL, et al. Among authors: zhao m. Mol Psychiatry. 2020 Jun;25(6):1334-1343. doi: 10.1038/s41380-019-0516-z. Epub 2019 Sep 9. Mol Psychiatry. 2020. PMID: 31501512 Free PMC article.
Cell Type-Specific Methylome-wide Association Studies Implicate Neurotrophin and Innate Immune Signaling in Major Depressive Disorder.
Chan RF, Turecki G, Shabalin AA, Guintivano J, Zhao M, Xie LY, van Grootheest G, Kaminsky ZA, Dean B, Penninx BWJH, Aberg KA, van den Oord EJCG. Chan RF, et al. Among authors: zhao m. Biol Psychiatry. 2020 Mar 1;87(5):431-442. doi: 10.1016/j.biopsych.2019.10.014. Epub 2019 Nov 1. Biol Psychiatry. 2020. PMID: 31889537 Free PMC article.
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