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Page 1
Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion.
Hadfield J, Harris SR, Seth-Smith HMB, Parmar S, Andersson P, Giffard PM, Schachter J, Moncada J, Ellison L, Vaulet MLG, Fermepin MR, Radebe F, Mendoza S, Ouburg S, Morré SA, Sachse K, Puolakkainen M, Korhonen SJ, Sonnex C, Wiggins R, Jalal H, Brunelli T, Casprini P, Pitt R, Ison C, Savicheva A, Shipitsyna E, Hadad R, Kari L, Burton MJ, Mabey D, Solomon AW, Lewis D, Marsh P, Unemo M, Clarke IN, Parkhill J, Thomson NR. Hadfield J, et al. Among authors: marsh p. Genome Res. 2017 Jul;27(7):1220-1229. doi: 10.1101/gr.212647.116. Epub 2017 Jun 6. Genome Res. 2017. PMID: 28588068 Free PMC article.
Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing.
Harris SR, Clarke IN, Seth-Smith HM, Solomon AW, Cutcliffe LT, Marsh P, Skilton RJ, Holland MJ, Mabey D, Peeling RW, Lewis DA, Spratt BG, Unemo M, Persson K, Bjartling C, Brunham R, de Vries HJ, Morré SA, Speksnijder A, Bébéar CM, Clerc M, de Barbeyrac B, Parkhill J, Thomson NR. Harris SR, et al. Among authors: marsh p. Nat Genet. 2012 Mar 11;44(4):413-9, S1. doi: 10.1038/ng.2214. Nat Genet. 2012. PMID: 22406642 Free PMC article.
Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture.
Seth-Smith HM, Harris SR, Skilton RJ, Radebe FM, Golparian D, Shipitsyna E, Duy PT, Scott P, Cutcliffe LT, O'Neill C, Parmar S, Pitt R, Baker S, Ison CA, Marsh P, Jalal H, Lewis DA, Unemo M, Clarke IN, Parkhill J, Thomson NR. Seth-Smith HM, et al. Among authors: marsh p. Genome Res. 2013 May;23(5):855-66. doi: 10.1101/gr.150037.112. Epub 2013 Mar 22. Genome Res. 2013. PMID: 23525359 Free PMC article.
Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates.
Thomson NR, Holden MT, Carder C, Lennard N, Lockey SJ, Marsh P, Skipp P, O'Connor CD, Goodhead I, Norbertzcak H, Harris B, Ormond D, Rance R, Quail MA, Parkhill J, Stephens RS, Clarke IN. Thomson NR, et al. Among authors: marsh p. Genome Res. 2008 Jan;18(1):161-71. doi: 10.1101/gr.7020108. Epub 2007 Nov 21. Genome Res. 2008. PMID: 18032721 Free PMC article.
The Nature and Extent of Plasmid Variation in Chlamydia trachomatis.
Jones CA, Hadfield J, Thomson NR, Cleary DW, Marsh P, Clarke IN, O'Neill CE. Jones CA, et al. Among authors: marsh p. Microorganisms. 2020 Mar 6;8(3):373. doi: 10.3390/microorganisms8030373. Microorganisms. 2020. PMID: 32155798 Free PMC article.
Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain.
Seth-Smith HM, Harris SR, Persson K, Marsh P, Barron A, Bignell A, Bjartling C, Clark L, Cutcliffe LT, Lambden PR, Lennard N, Lockey SJ, Quail MA, Salim O, Skilton RJ, Wang Y, Holland MJ, Parkhill J, Thomson NR, Clarke IN. Seth-Smith HM, et al. Among authors: marsh p. BMC Genomics. 2009 May 21;10:239. doi: 10.1186/1471-2164-10-239. BMC Genomics. 2009. PMID: 19460133 Free PMC article.
Genome sequence of the zoonotic pathogen Chlamydophila psittaci.
Seth-Smith HM, Harris SR, Rance R, West AP, Severin JA, Ossewaarde JM, Cutcliffe LT, Skilton RJ, Marsh P, Parkhill J, Clarke IN, Thomson NR. Seth-Smith HM, et al. Among authors: marsh p. J Bacteriol. 2011 Mar;193(5):1282-3. doi: 10.1128/JB.01435-10. Epub 2010 Dec 23. J Bacteriol. 2011. PMID: 21183672 Free PMC article.
523 results