Alexeev N - Search Results

1

Estimation of the true evolutionary distance under the fragile breakage model.

Alexeev N, Alekseyev MA. Alexeev N, et al. BMC Genomics. 2017 May 24;18(Suppl 4):356. doi: 10.1186/s12864-017-3733-3. BMC Genomics. 2017. PMID: 28589865 Free PMC article.

2

TRAIL-Based High Throughput Screening Reveals a Link between TRAIL-Mediated Apoptosis and Glutathione Reductase, a Key Component of Oxidative Stress Response.

Rozanov D, Cheltsov A, Sergienko E, Vasile S, Golubkov V, Aleshin AE, Levin T, Traer E, Hann B, Freimuth J, Alexeev N, Alekseyev MA, Budko SP, Bächinger HP, Spellman P. Rozanov D, et al. Among authors: alexeev n. PLoS One. 2015 Jun 15;10(6):e0129566. doi: 10.1371/journal.pone.0129566. eCollection 2015. PLoS One. 2015. PMID: 26075913 Free PMC article.

3

Generalized Hultman Numbers and Cycle Structures of Breakpoint Graphs.

Alexeev N, Pologova A, Alekseyev MA. Alexeev N, et al. J Comput Biol. 2017 Feb;24(2):93-105. doi: 10.1089/cmb.2016.0190. Epub 2017 Jan 3. J Comput Biol. 2017. PMID: 28045556

4

Comparative genomics meets topology: a novel view on genome median and halving problems.

Alexeev N, Avdeyev P, Alekseyev MA. Alexeev N, et al. BMC Bioinformatics. 2016 Nov 11;17(Suppl 14):418. doi: 10.1186/s12859-016-1263-7. BMC Bioinformatics. 2016. PMID: 28185564 Free PMC article.

5

Combinatorial Scoring of Phylogenetic Trees and Networks Based on Homoplasy-Free Characters.

Alexeev N, Alekseyev MA. Alexeev N, et al. J Comput Biol. 2018 Nov;25(11):1203-1219. doi: 10.1089/cmb.2018.0082. Epub 2018 Aug 22. J Comput Biol. 2018. PMID: 30133318

6

A unified ILP framework for core ancestral genome reconstruction problems.

Avdeyev P, Alexeev N, Rong Y, Alekseyev MA. Avdeyev P, et al. Among authors: alexeev n. Bioinformatics. 2020 May 1;36(10):2993-3003. doi: 10.1093/bioinformatics/btaa100. Bioinformatics. 2020. PMID: 32058559

7

Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis.

Zamyatin A, Avdeyev P, Liang J, Sharma A, Chen C, Lukyanchikova V, Alexeev N, Tu Z, Alekseyev MA, Sharakhov IV. Zamyatin A, et al. Among authors: alexeev n. Gigascience. 2021 Mar 15;10(3):giab017. doi: 10.1093/gigascience/giab017. Gigascience. 2021. PMID: 33718948 Free PMC article.

8

TruEst: a better estimator of evolutionary distance under the INFER model.

Zabelkin A, Avdeyev P, Alexeev N. Zabelkin A, et al. Among authors: alexeev n. J Math Biol. 2023 Jul 10;87(2):25. doi: 10.1007/s00285-023-01955-z. J Math Biol. 2023. PMID: 37423919

9

Random matrix approach to the distribution of genomic distance.

Alexeev N, Zograf P. Alexeev N, et al. J Comput Biol. 2014 Aug;21(8):622-31. doi: 10.1089/cmb.2013.0066. Epub 2014 Mar 20. J Comput Biol. 2014. PMID: 24650202 Free PMC article.

10

Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes.

Bernot JP, Avdeyev P, Zamyatin A, Dreyer N, Alexeev N, Pérez-Losada M, Crandall KA. Bernot JP, et al. Among authors: alexeev n. Gigascience. 2022 Mar 12;11:giac021. doi: 10.1093/gigascience/giac021. Gigascience. 2022. PMID: 35277961 Free PMC article.

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