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Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS.
Rosenberger G, Liu Y, Röst HL, Ludwig C, Buil A, Bensimon A, Soste M, Spector TD, Dermitzakis ET, Collins BC, Malmström L, Aebersold R. Rosenberger G, et al. Among authors: aebersold r. Nat Biotechnol. 2017 Aug;35(8):781-788. doi: 10.1038/nbt.3908. Epub 2017 Jun 12. Nat Biotechnol. 2017. PMID: 28604659 Free PMC article.
A common open representation of mass spectrometry data and its application to proteomics research.
Pedrioli PG, Eng JK, Hubley R, Vogelzang M, Deutsch EW, Raught B, Pratt B, Nilsson E, Angeletti RH, Apweiler R, Cheung K, Costello CE, Hermjakob H, Huang S, Julian RK, Kapp E, McComb ME, Oliver SG, Omenn G, Paton NW, Simpson R, Smith R, Taylor CF, Zhu W, Aebersold R. Pedrioli PG, et al. Among authors: aebersold r. Nat Biotechnol. 2004 Nov;22(11):1459-66. doi: 10.1038/nbt1031. Nat Biotechnol. 2004. PMID: 15529173
Computational prediction of proteotypic peptides for quantitative proteomics.
Mallick P, Schirle M, Chen SS, Flory MR, Lee H, Martin D, Ranish J, Raught B, Schmitt R, Werner T, Kuster B, Aebersold R. Mallick P, et al. Among authors: aebersold r. Nat Biotechnol. 2007 Jan;25(1):125-31. doi: 10.1038/nbt1275. Epub 2006 Dec 31. Nat Biotechnol. 2007. PMID: 17195840
Advances in proteomic workflows for systems biology.
Malmström J, Lee H, Aebersold R. Malmström J, et al. Among authors: aebersold r. Curr Opin Biotechnol. 2007 Aug;18(4):378-84. doi: 10.1016/j.copbio.2007.07.005. Epub 2007 Aug 14. Curr Opin Biotechnol. 2007. PMID: 17698335 Free PMC article.
Identification of cross-linked peptides from large sequence databases.
Rinner O, Seebacher J, Walzthoeni T, Mueller LN, Beck M, Schmidt A, Mueller M, Aebersold R. Rinner O, et al. Among authors: aebersold r. Nat Methods. 2008 Apr;5(4):315-8. doi: 10.1038/nmeth.1192. Epub 2008 Mar 9. Nat Methods. 2008. PMID: 18327264 Free PMC article.
906 results