Gibson TJ - Search Results

1

Exploring Short Linear Motifs Using the ELM Database and Tools.

Gouw M, Sámano-Sánchez H, Van Roey K, Diella F, Gibson TJ, Dinkel H. Gouw M, et al. Among authors: gibson tj. Curr Protoc Bioinformatics. 2017 Jun 27;58:8.22.1-8.22.35. doi: 10.1002/cpbi.26. Curr Protoc Bioinformatics. 2017. PMID: 28654726

2

ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins.

Puntervoll P, Linding R, Gemünd C, Chabanis-Davidson S, Mattingsdal M, Cameron S, Martin DM, Ausiello G, Brannetti B, Costantini A, Ferrè F, Maselli V, Via A, Cesareni G, Diella F, Superti-Furga G, Wyrwicz L, Ramu C, McGuigan C, Gudavalli R, Letunic I, Bork P, Rychlewski L, Küster B, Helmer-Citterich M, Hunter WN, Aasland R, Gibson TJ. Puntervoll P, et al. Among authors: gibson tj. Nucleic Acids Res. 2003 Jul 1;31(13):3625-30. doi: 10.1093/nar/gkg545. Nucleic Acids Res. 2003. PMID: 12824381 Free PMC article.

3

GlobPlot: Exploring protein sequences for globularity and disorder.

Linding R, Russell RB, Neduva V, Gibson TJ. Linding R, et al. Among authors: gibson tj. Nucleic Acids Res. 2003 Jul 1;31(13):3701-8. doi: 10.1093/nar/gkg519. Nucleic Acids Res. 2003. PMID: 12824398 Free PMC article.

4

Protein disorder prediction: implications for structural proteomics.

Linding R, Jensen LJ, Diella F, Bork P, Gibson TJ, Russell RB. Linding R, et al. Among authors: gibson tj. Structure. 2003 Nov;11(11):1453-9. doi: 10.1016/j.str.2003.10.002. Structure. 2003. PMID: 14604535 Free article.

5

Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins.

Diella F, Cameron S, Gemünd C, Linding R, Via A, Kuster B, Sicheritz-Pontén T, Blom N, Gibson TJ. Diella F, et al. Among authors: gibson tj. BMC Bioinformatics. 2004 Jun 22;5:79. doi: 10.1186/1471-2105-5-79. BMC Bioinformatics. 2004. PMID: 15212693 Free PMC article.

6

Phospho.ELM: a database of phosphorylation sites--update 2008.

Diella F, Gould CM, Chica C, Via A, Gibson TJ. Diella F, et al. Among authors: gibson tj. Nucleic Acids Res. 2008 Jan;36(Database issue):D240-4. doi: 10.1093/nar/gkm772. Epub 2007 Oct 25. Nucleic Acids Res. 2008. PMID: 17962309 Free PMC article.

7

Discovery of candidate KEN-box motifs using cell cycle keyword enrichment combined with native disorder prediction and motif conservation.

Michael S, Travé G, Ramu C, Chica C, Gibson TJ. Michael S, et al. Among authors: gibson tj. Bioinformatics. 2008 Feb 15;24(4):453-7. doi: 10.1093/bioinformatics/btm624. Epub 2008 Jan 9. Bioinformatics. 2008. PMID: 18184688

8

A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences.

Chica C, Labarga A, Gould CM, López R, Gibson TJ. Chica C, et al. Among authors: gibson tj. BMC Bioinformatics. 2008 May 6;9:229. doi: 10.1186/1471-2105-9-229. BMC Bioinformatics. 2008. PMID: 18460207 Free PMC article.

9

Understanding eukaryotic linear motifs and their role in cell signaling and regulation.

Diella F, Haslam N, Chica C, Budd A, Michael S, Brown NP, Trave G, Gibson TJ. Diella F, et al. Among authors: gibson tj. Front Biosci. 2008 May 1;13:6580-603. doi: 10.2741/3175. Front Biosci. 2008. PMID: 18508681 Review.

10

KEPE--a motif frequently superimposed on sumoylation sites in metazoan chromatin proteins and transcription factors.

Diella F, Chabanis S, Luck K, Chica C, Ramu C, Nerlov C, Gibson TJ. Diella F, et al. Among authors: gibson tj. Bioinformatics. 2009 Jan 1;25(1):1-5. doi: 10.1093/bioinformatics/btn594. Epub 2008 Nov 24. Bioinformatics. 2009. PMID: 19033273 Free PMC article.

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