Mercadante D - Search Results

1

Decoupling of size and shape fluctuations in heteropolymeric sequences reconciles discrepancies in SAXS vs. FRET measurements.

Fuertes G, Banterle N, Ruff KM, Chowdhury A, Mercadante D, Koehler C, Kachala M, Estrada Girona G, Milles S, Mishra A, Onck PR, Gräter F, Esteban-Martín S, Pappu RV, Svergun DI, Lemke EA. Fuertes G, et al. Among authors: mercadante d. Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):E6342-E6351. doi: 10.1073/pnas.1704692114. Epub 2017 Jul 17. Proc Natl Acad Sci U S A. 2017. PMID: 28716919 Free PMC article.

2

Kirkwood-Buff Approach Rescues Overcollapse of a Disordered Protein in Canonical Protein Force Fields.

Mercadante D, Milles S, Fuertes G, Svergun DI, Lemke EA, Gräter F. Mercadante D, et al. J Phys Chem B. 2015 Jun 25;119(25):7975-84. doi: 10.1021/acs.jpcb.5b03440. Epub 2015 Jun 15. J Phys Chem B. 2015. PMID: 26030189

3

Plasticity of an ultrafast interaction between nucleoporins and nuclear transport receptors.

Milles S, Mercadante D, Aramburu IV, Jensen MR, Banterle N, Koehler C, Tyagi S, Clarke J, Shammas SL, Blackledge M, Gräter F, Lemke EA. Milles S, et al. Among authors: mercadante d. Cell. 2015 Oct 22;163(3):734-45. doi: 10.1016/j.cell.2015.09.047. Epub 2015 Oct 8. Cell. 2015. PMID: 26456112 Free PMC article.

4

Sampling Long- versus Short-Range Interactions Defines the Ability of Force Fields To Reproduce the Dynamics of Intrinsically Disordered Proteins.

Mercadante D, Wagner JA, Aramburu IV, Lemke EA, Gräter F. Mercadante D, et al. J Chem Theory Comput. 2017 Sep 12;13(9):3964-3974. doi: 10.1021/acs.jctc.7b00143. Epub 2017 Aug 28. J Chem Theory Comput. 2017. PMID: 28805390

5

Two Differential Binding Mechanisms of FG-Nucleoporins and Nuclear Transport Receptors.

Tan PS, Aramburu IV, Mercadante D, Tyagi S, Chowdhury A, Spitz D, Shammas SL, Gräter F, Lemke EA. Tan PS, et al. Among authors: mercadante d. Cell Rep. 2018 Mar 27;22(13):3660-3671. doi: 10.1016/j.celrep.2018.03.022. Cell Rep. 2018. PMID: 29590630 Free PMC article.

6

Origin of Orthogonality of Strain-Promoted Click Reactions.

Wagner JA, Mercadante D, Nikić I, Lemke EA, Gräter F. Wagner JA, et al. Among authors: mercadante d. Chemistry. 2015 Aug 24;21(35):12431-5. doi: 10.1002/chem.201501727. Epub 2015 Jul 14. Chemistry. 2015. PMID: 26178299 Free PMC article.

7

CONAN: A Tool to Decode Dynamical Information from Molecular Interaction Maps.

Mercadante D, Gräter F, Daday C. Mercadante D, et al. Biophys J. 2018 Mar 27;114(6):1267-1273. doi: 10.1016/j.bpj.2018.01.033. Biophys J. 2018. PMID: 29590584 Free PMC article.

8

Structural and mechanistic insights into mechanoactivation of focal adhesion kinase.

Bauer MS, Baumann F, Daday C, Redondo P, Durner E, Jobst MA, Milles LF, Mercadante D, Pippig DA, Gaub HE, Gräter F, Lietha D. Bauer MS, et al. Among authors: mercadante d. Proc Natl Acad Sci U S A. 2019 Apr 2;116(14):6766-6774. doi: 10.1073/pnas.1820567116. Epub 2019 Mar 15. Proc Natl Acad Sci U S A. 2019. PMID: 30877242 Free PMC article.

9

Minicollagen cysteine-rich domains encode distinct modes of polymerization to form stable nematocyst capsules.

Tursch A, Mercadante D, Tennigkeit J, Gräter F, Özbek S. Tursch A, et al. Among authors: mercadante d. Sci Rep. 2016 May 11;6:25709. doi: 10.1038/srep25709. Sci Rep. 2016. PMID: 27166560 Free PMC article.

10

Mechanical force can enhance c-Src kinase activity by impairing autoinhibition.

Daday C, de Buhr S, Mercadante D, Gräter F. Daday C, et al. Among authors: mercadante d. Biophys J. 2022 Mar 1;121(5):684-691. doi: 10.1016/j.bpj.2022.01.028. Epub 2022 Feb 2. Biophys J. 2022. PMID: 35120901 Free PMC article.

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